Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NKX2-1P43699 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.94□□□□□ -1.94
NKX2-1P43699 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-1P43699 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AC073343.1-201ENST00000328239 651 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NKX2-1P43699 Y_RNA.1-201ENST00000352915 104 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 SNORD56.2-201ENST00000363242 71 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 RNU6-282P-201ENST00000365357 103 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 RNU6-606P-201ENST00000384721 111 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 SOD2P1-201ENST00000396543 562 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 RAC1P6-201ENST00000423911 575 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX2-1P43699 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 C4BPAP2-201ENST00000428434 478 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 RPL23AP69-201ENST00000431134 458 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 PIGFP3-201ENST00000441918 722 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AL357552.1-201ENST00000445254 415 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 HMGB3P8-201ENST00000449709 577 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-1P43699 ARL4AP2-201ENST00000507378 601 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AC114797.1-201ENST00000514003 728 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 MIR2116-201ENST00000517221 80 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.93□□□□□ -1.94
NKX2-1P43699 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.93□□□□□ -1.94
NKX2-1P43699 AL157687.1-201ENST00000554853 619 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AC034105.3-201ENST00000565294 442 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 HMGB1P6-201ENST00000569046 646 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 MIR3609-201ENST00000582661 80 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 GLUD1P4-201ENST00000590914 418 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AC006077.1-201ENST00000604746 343 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AL591034.3-201ENST00000605511 685 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 MIR98-201ENST00000606724 119 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.93□□□□□ -1.94
NKX2-1P43699 U6atac.1-201ENST00000616025 117 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AC006338.1-201ENST00000618453 749 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 AL158209.2-201ENST00000619266 216 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 CR381653.2-201ENST00000624041 768 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.93□□□□□ -1.94
NKX2-1P43699 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NKX2-1P43699 MTND5P17-201ENST00000418405 1603 ntBASIC2.93□□□□□ -1.94
NKX2-1P43699 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NKX2-1P43699 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-1P43699 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NKX2-1P43699 RLIMP1-201ENST00000339626 1680 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 Y_RNA.22-201ENST00000362492 102 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 SNORA73.2-201ENST00000364946 201 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 RNU6-805P-201ENST00000365643 106 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 RPL21P65-201ENST00000406094 466 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 RNU4-55P-201ENST00000410731 137 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 RNA5SP31-201ENST00000411144 127 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC093578.1-201ENST00000415219 368 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 MTATP6P18-201ENST00000417994 673 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 ELOCP4-201ENST00000420090 333 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.92□□□□□ -1.94
NKX2-1P43699 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AL358934.1-201ENST00000432346 324 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 UBE2V1P8-201ENST00000437166 265 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 DDX3P2-201ENST00000446138 111 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AL356010.1-201ENST00000456364 102 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AC126389.1-201ENST00000477436 290 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AL160314.1-201ENST00000490836 438 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 RNU7-51P-201ENST00000516560 62 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 SNORA70.19-201ENST00000516717 90 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 RNU6-352P-201ENST00000516908 107 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 RNU6-410P-201ENST00000517006 107 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 HIGD1AP1-201ENST00000550979 275 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 RPL21P12-201ENST00000559810 515 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AMZ2P1-203ENST00000565833 850 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 AC007363.1-201ENST00000604736 620 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.92□□□□□ -1.94
NKX2-1P43699 MIR6867-201ENST00000610636 67 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 AC099778.2-201ENST00000610904 211 ntBASIC2.92□□□□□ -1.94
NKX2-1P43699 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms