Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC090151.1-201ENST00000520784 730 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 RPL23AP53-201ENST00000521854 457 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AL390726.5-202ENST00000564800 256 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC007566.2-201ENST00000603642 413 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AC098826.3-201ENST00000603823 466 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AL022401.1-201ENST00000619498 108 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AC138965.3-201ENST00000623875 498 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.97□□□□□ -1.61
CHRNA4P43681 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRNA4P43681 AC027228.2-201ENST00000567141 2154 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU6-923P-201ENST00000364753 107 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 U8.8-201ENST00000365399 135 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU6-326P-201ENST00000365480 107 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU6-898P-201ENST00000365627 104 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RNY3P4-201ENST00000384428 101 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AL079342.1-201ENST00000401460 267 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 Y_RNA.590-201ENST00000410140 107 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RN7SKP213-201ENST00000410746 298 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU6-651P-201ENST00000411040 105 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU2-61P-201ENST00000411069 191 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 TBCAP2-201ENST00000416175 326 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC022022.1-201ENST00000430304 178 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA4P43681 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 AC000111.2-201ENST00000448200 210 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AL353691.1-201ENST00000451332 387 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 RPL37P6-202ENST00000464216 403 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RN7SL319P-201ENST00000480656 221 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC135721.1-201ENST00000497954 479 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA4P43681 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU4-57P-201ENST00000515980 135 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 RNU6-426P-201ENST00000516464 97 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA4P43681 AC018442.3-201ENST00000523025 183 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC120057.2-201ENST00000571520 271 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 MIR5696-201ENST00000578474 85 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 AC068790.4-201ENST00000602474 263 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 MIR3976-201ENST00000606807 139 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 AC019206.1-201ENST00000621938 425 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA4P43681 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 OR9K1P-202ENST00000641111 3217 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 AL672167.1-204ENST00000641875 3017 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CHRNA4P43681 THAP12P5-201ENST00000405864 2275 ntBASIC4.97□□□□□ -1.61
CHRNA4P43681 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA4P43681 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.96□□□□□ -1.62
CHRNA4P43681 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.82-201ENST00000363000 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.92-201ENST00000363043 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.235-201ENST00000364412 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.306-201ENST00000365015 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.312-201ENST00000365089 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.322-201ENST00000365151 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.96□□□□□ -1.62
CHRNA4P43681 AL078599.1-201ENST00000402075 293 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AL513475.1-201ENST00000406602 315 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 RN7SKP159-201ENST00000410657 292 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 RN7SKP216-201ENST00000411050 312 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 RPL23AP27-201ENST00000415161 451 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 AC234779.1-201ENST00000425910 285 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 MTCO1P39-201ENST00000426148 480 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 AL591043.1-201ENST00000432461 424 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 PSMD10P3-201ENST00000437000 448 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AP000936.3-201ENST00000438127 255 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms