Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 RPL23AP82-202ENST00000427528 469 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 OR2AS1P-201ENST00000427827 319 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 MED13P1-201ENST00000428342 171 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 HMGN2P31-201ENST00000432430 273 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 FCF1P1-201ENST00000432690 571 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC002486.1-201ENST00000435098 391 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RPL36AP6-201ENST00000435770 321 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AL451074.3-201ENST00000437709 472 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC008264.1-201ENST00000447612 367 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 CENPBD1P1-201ENST00000464061 469 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC092451.1-201ENST00000480211 153 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 AC108860.1-201ENST00000484521 383 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RPL21P129-201ENST00000491732 478 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RPL23AP55-201ENST00000498163 452 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 FCF1P8-201ENST00000510322 597 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 SNORA67.7-201ENST00000516664 135 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 IGKV2-26-201ENST00000518305 343 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC107934.2-201ENST00000518653 310 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 FAM60DP-201ENST00000524174 632 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.56□□□□□ -1.84
PTPN9P43378 FAM92A1P1-201ENST00000528023 890 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 AC093012.1-202ENST00000549403 582 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AL359212.1-201ENST00000556608 614 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 MED28P6-201ENST00000558776 231 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RPL21P12-201ENST00000559810 515 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 AF038458.1-201ENST00000588406 262 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 GLUD1P4-201ENST00000590914 418 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 AC007684.1-201ENST00000609671 477 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.56□□□□□ -1.84
PTPN9P43378 CR381653.2-201ENST00000624041 768 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC048347.1-201ENST00000624621 427 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC005609.4-201ENST00000625071 447 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN9P43378 OR5H6-203ENST00000642105 978 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 AF127577.6-201ENST00000623352 2191 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN9P43378 AC093010.3-201ENST00000570269 15214 ntBASIC3.56□□□□□ -1.84
PTPN9P43378 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN9P43378 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN9P43378 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN9P43378 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN9P43378 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN9P43378 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN9P43378 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN9P43378 Y_RNA.1-201ENST00000352915 104 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 RNU5E-6P-201ENST00000365574 115 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PTPN9P43378 SNORA48.7-201ENST00000391302 135 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 MIR1290-201ENST00000408735 78 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN9P43378 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN9P43378 RPL27AP8-201ENST00000424277 446 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 MTCO2P19-201ENST00000427513 598 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 DPPA2P1-201ENST00000428060 556 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN9P43378 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN9P43378 HSPE1P6-201ENST00000479457 291 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN9P43378 AC079382.1-201ENST00000493346 557 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC114797.1-201ENST00000514003 728 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC093331.1-201ENST00000521474 169 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN9P43378 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN9P43378 RPS3AP4-201ENST00000555161 764 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN9P43378 RPL23AP84-201ENST00000571193 464 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN9P43378 AP001094.1-201ENST00000579805 193 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 BDH2P1-201ENST00000602288 736 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.6-201ENST00000603753 252 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.11-201ENST00000604059 253 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC008162.1-201ENST00000604718 254 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.1-201ENST00000604752 252 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.5-201ENST00000605253 252 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.12-201ENST00000605291 253 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.8-201ENST00000605353 252 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AL670379.7-201ENST00000605823 252 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AP002360.4-201ENST00000606980 481 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 U3.45-201ENST00000607547 219 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN9P43378 U6atac.1-201ENST00000616025 117 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 MIR6863-201ENST00000636112 90 ntBASIC3.55□□□□□ -1.84
PTPN9P43378 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN9P43378 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN9P43378 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN9P43378 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms