Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC112503.2-201ENST00000609005 552 ntBASIC0.91□□□□□ -2.26
HTTP42858 AC005156.1-201ENST00000613371 573 ntBASIC0.91□□□□□ -2.26
HTTP42858 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HTTP42858 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.91□□□□□ -2.26
HTTP42858 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.91□□□□□ -2.26
HTTP42858 AC067942.3-201ENST00000512025 362 ntBASIC0.91□□□□□ -2.26
HTTP42858 AC079148.1-201ENST00000565944 819 ntBASIC0.91□□□□□ -2.26
HTTP42858 AC146944.4-201ENST00000602697 718 ntBASIC0.91□□□□□ -2.26
HTTP42858 C2orf27A-204ENST00000623058 969 ntBASIC0.91□□□□□ -2.26
HTTP42858 MIR6759-201ENST00000638110 65 ntBASIC0.91□□□□□ -2.26
HTTP42858 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
HTTP42858 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HTTP42858 OR1L1-202ENST00000373686 1083 ntBASIC0.91□□□□□ -2.26
HTTP42858 RNU6-997P-201ENST00000384725 107 ntBASIC0.91□□□□□ -2.26
HTTP42858 Z99497.1-201ENST00000421282 135 ntBASIC0.91□□□□□ -2.26
HTTP42858 MORF4L1P7-201ENST00000426038 703 ntBASIC0.91□□□□□ -2.26
HTTP42858 AP001960.1-201ENST00000506494 658 ntBASIC0.91□□□□□ -2.26
HTTP42858 SNORA31.20-201ENST00000517111 133 ntBASIC0.91□□□□□ -2.26
HTTP42858 SNORA31.23-201ENST00000517219 133 ntBASIC0.91□□□□□ -2.26
HTTP42858 AC125611.2-201ENST00000551907 647 ntBASIC0.91□□□□□ -2.26
HTTP42858 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HTTP42858 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.91□□□□□ -2.26
HTTP42858 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.9□□□□□ -2.26
HTTP42858 RNU1-62P-201ENST00000362599 164 ntBASIC0.9□□□□□ -2.27
HTTP42858 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.9□□□□□ -2.27
HTTP42858 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.9□□□□□ -2.27
HTTP42858 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.9□□□□□ -2.27
HTTP42858 AC104997.1-201ENST00000519761 717 ntBASIC0.9□□□□□ -2.27
HTTP42858 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.9□□□□□ -2.27
HTTP42858 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.9□□□□□ -2.27
HTTP42858 MIR6840-201ENST00000611937 71 ntBASIC0.9□□□□□ -2.27
HTTP42858 uc_338.22-201ENST00000622722 187 ntBASIC0.9□□□□□ -2.27
HTTP42858 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HTTP42858 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HTTP42858 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.9□□□□□ -2.27
HTTP42858 AC074029.2-201ENST00000551045 634 ntBASIC0.9□□□□□ -2.27
HTTP42858 ZNF192P1-203ENST00000565888 810 ntBASIC0.9□□□□□ -2.27
HTTP42858 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.9□□□□□ -2.27
HTTP42858 AC004022.2-201ENST00000413824 193 ntBASIC0.89□□□□□ -2.27
HTTP42858 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.89□□□□□ -2.27
HTTP42858 AC239860.2-201ENST00000525886 270 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.89□□□□□ -2.27
HTTP42858 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.89□□□□□ -2.27
HTTP42858 ELL2P3-201ENST00000457883 1602 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.89□□□□□ -2.27
HTTP42858 RPS20P10-201ENST00000451209 253 ntBASIC0.89□□□□□ -2.27
HTTP42858 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.89□□□□□ -2.27
HTTP42858 RN7SKP179-201ENST00000516126 217 ntBASIC0.89□□□□□ -2.27
HTTP42858 HSPE1P20-201ENST00000538133 289 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC073544.1-201ENST00000600110 1595 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC023050.2-201ENST00000544968 387 ntBASIC0.89□□□□□ -2.27
HTTP42858 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HTTP42858 AC091057.2-201ENST00000602594 792 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC002550.2-201ENST00000621246 394 ntBASIC0.89□□□□□ -2.27
HTTP42858 AC024595.1-201ENST00000623088 387 ntBASIC0.89□□□□□ -2.27
HTTP42858 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.88□□□□□ -2.27
HTTP42858 Y_RNA.488-201ENST00000384403 102 ntBASIC0.88□□□□□ -2.27
HTTP42858 MIR144-201ENST00000384886 86 ntBASIC0.88□□□□□ -2.27
HTTP42858 LINC01347-201ENST00000417964 355 ntBASIC0.88□□□□□ -2.27
HTTP42858 GTF2IP12-201ENST00000456547 356 ntBASIC0.88□□□□□ -2.27
HTTP42858 ATG12P2-201ENST00000456830 416 ntBASIC0.88□□□□□ -2.27
HTTP42858 RPS27AP18-201ENST00000515536 459 ntBASIC0.88□□□□□ -2.27
HTTP42858 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.88□□□□□ -2.27
HTTP42858 AC133485.1-201ENST00000567176 124 ntBASIC0.88□□□□□ -2.27
HTTP42858 AC138907.6-201ENST00000568401 126 ntBASIC0.88□□□□□ -2.27
HTTP42858 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.88□□□□□ -2.27
HTTP42858 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.88□□□□□ -2.27
HTTP42858 PGBD4P3-201ENST00000440731 581 ntBASIC0.88□□□□□ -2.27
HTTP42858 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.88□□□□□ -2.27
HTTP42858 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.88□□□□□ -2.27
HTTP42858 AL391261.3-201ENST00000557194 520 ntBASIC0.88□□□□□ -2.27
HTTP42858 AC090897.2-201ENST00000581715 130 ntBASIC0.88□□□□□ -2.27
HTTP42858 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.87□□□□□ -2.27
HTTP42858 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.87□□□□□ -2.27
HTTP42858 PGBD4P6-201ENST00000421501 610 ntBASIC0.87□□□□□ -2.27
HTTP42858 AL022238.1-201ENST00000442557 355 ntBASIC0.87□□□□□ -2.27
HTTP42858 ARPC3P2-201ENST00000457786 533 ntBASIC0.87□□□□□ -2.27
HTTP42858 PABPC1P3-201ENST00000469174 459 ntBASIC0.87□□□□□ -2.27
HTTP42858 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.87□□□□□ -2.27
HTTP42858 HSPE1P14-201ENST00000605812 302 ntBASIC0.87□□□□□ -2.27
HTTP42858 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HTTP42858 NACAP2-201ENST00000318548 624 ntBASIC0.87□□□□□ -2.27
HTTP42858 Y_RNA.324-201ENST00000365165 102 ntBASIC0.87□□□□□ -2.27
HTTP42858 RPL23AP32-201ENST00000395315 459 ntBASIC0.87□□□□□ -2.27
HTTP42858 RNU2-40P-201ENST00000410833 196 ntBASIC0.87□□□□□ -2.27
HTTP42858 AC022493.1-201ENST00000492984 337 ntBASIC0.87□□□□□ -2.27
HTTP42858 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.87□□□□□ -2.27
HTTP42858 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.87□□□□□ -2.27
HTTP42858 AL050343.2-201ENST00000607338 280 ntBASIC0.87□□□□□ -2.27
HTTP42858 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
HTTP42858 SSXP9-201ENST00000417503 292 ntBASIC0.86□□□□□ -2.27
HTTP42858 USP12PX-201ENST00000432383 1057 ntBASIC0.86□□□□□ -2.27
HTTP42858 AC018437.1-201ENST00000492214 406 ntBASIC0.86□□□□□ -2.27
HTTP42858 BOLA3P3-201ENST00000505182 232 ntBASIC0.86□□□□□ -2.27
HTTP42858 AC023141.11-201ENST00000508864 202 ntBASIC0.86□□□□□ -2.27
HTTP42858 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
HTTP42858 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.86□□□□□ -2.27
HTTP42858 RNU6-942P-201ENST00000363002 107 ntBASIC0.86□□□□□ -2.27
HTTP42858 RNU6-418P-201ENST00000384035 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms