Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC090572.1-201ENST00000519251 160 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 FAM60DP-201ENST00000524174 632 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AC109635.3-201ENST00000529536 185 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD12P35452 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD12P35452 AL157687.1-201ENST00000554853 619 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXD12P35452 MIR548S-201ENST00000581352 82 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 U6.42-201ENST00000618440 107 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 MIR6130-201ENST00000619419 109 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD12P35452 AC009161.2-201ENST00000624626 138 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD12P35452 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.82□□□□□ -1.8
HOXD12P35452 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXD12P35452 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD12P35452 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HOXD12P35452 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD12P35452 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD12P35452 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 Y_RNA.88-201ENST00000363029 99 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 RNU6-432P-201ENST00000384196 109 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 RNY3P14-201ENST00000384309 102 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 Y_RNA.573-201ENST00000384763 105 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 EI24P2-201ENST00000397776 1076 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 MTATP6P18-201ENST00000417994 673 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 HMGB3P20-201ENST00000417997 600 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 RPL23AP30-201ENST00000432419 501 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 GPR143P-201ENST00000434155 205 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 RPS3AP46-201ENST00000448352 682 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 RNA5SP310-201ENST00000459084 116 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AL049714.1-201ENST00000466686 347 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD12P35452 RPS3AP50-201ENST00000487064 803 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD12P35452 AC104619.4-201ENST00000510773 249 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD12P35452 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXD12P35452 AL133153.1-201ENST00000557756 303 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD12P35452 AC009570.1-201ENST00000609599 745 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AC064801.1-201ENST00000612025 407 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AL442067.2-201ENST00000614033 363 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 AC002553.4-201ENST00000616896 331 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 MIR6076-201ENST00000617521 113 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 MIR4275-201ENST00000636486 87 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 MIR1321-201ENST00000637766 79 ntBASIC3.81□□□□□ -1.8
HOXD12P35452 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD12P35452 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
HOXD12P35452 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXD12P35452 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD12P35452 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD12P35452 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXD12P35452 RNU5E-8P-201ENST00000363502 116 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 Y_RNA.390-201ENST00000383932 102 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 RNU6-637P-201ENST00000384050 107 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 Y_RNA.481-201ENST00000384373 102 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HOXD12P35452 HMGN2P8-201ENST00000391458 268 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 NDUFB4P4-201ENST00000404822 243 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 SNORA11.2-201ENST00000408318 127 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXD12P35452 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 MTATP6P4-201ENST00000427725 675 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 AC011742.1-201ENST00000431448 434 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 RPL35AP22-201ENST00000436855 335 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 HMGB3P12-201ENST00000438745 556 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD12P35452 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXD12P35452 CYCSP35-201ENST00000451978 304 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 AC007967.1-201ENST00000455422 1159 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXD12P35452 HMGN2P13-201ENST00000476476 274 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 AC135721.1-201ENST00000497954 479 ntBASIC3.8□□□□□ -1.8
HOXD12P35452 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXD12P35452 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms