Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AL359999.1-201ENST00000604513 294 ntBASIC2.9□□□□□ -1.95
SHC1P29353 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.9□□□□□ -1.95
SHC1P29353 RNU6-87P-201ENST00000607561 108 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AL355472.4-201ENST00000610233 626 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AC096577.2-201ENST00000611455 153 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AC009159.1-201ENST00000618386 642 ntBASIC2.9□□□□□ -1.95
SHC1P29353 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.9□□□□□ -1.95
SHC1P29353 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHC1P29353 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHC1P29353 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHC1P29353 MTND5P33-201ENST00000571250 1450 ntBASIC2.9□□□□□ -1.95
SHC1P29353 MAPK10-362ENST00000641864 4484 ntBASIC2.89□□□□□ -1.95
SHC1P29353 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHC1P29353 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.89□□□□□ -1.95
SHC1P29353 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHC1P29353 AL161781.1-201ENST00000354277 403 ntBASIC2.89□□□□□ -1.95
SHC1P29353 Y_RNA.88-201ENST00000363029 99 ntBASIC2.89□□□□□ -1.95
SHC1P29353 RNU4-12P-201ENST00000365233 139 ntBASIC2.89□□□□□ -1.95
SHC1P29353 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
SHC1P29353 RNU6-1207P-201ENST00000384343 107 ntBASIC2.89□□□□□ -1.95
SHC1P29353 RNU6-780P-201ENST00000391030 104 ntBASIC2.89□□□□□ -1.95
SHC1P29353 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 MTND4LP20-201ENST00000402379 270 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.89□□□□□ -1.95
SHC1P29353 MTND4LP10-201ENST00000435146 291 ntBASIC2.89□□□□□ -1.95
SHC1P29353 SDCBPP1-201ENST00000440192 890 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.89□□□□□ -1.95
SHC1P29353 RPL7P52-201ENST00000449200 742 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.89□□□□□ -1.95
SHC1P29353 HMGB1P15-201ENST00000453854 435 ntBASIC2.89□□□□□ -1.95
SHC1P29353 RN7SL75P-201ENST00000461926 281 ntBASIC2.89□□□□□ -1.95
SHC1P29353 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.89□□□□□ -1.95
SHC1P29353 RBM43P1-201ENST00000476891 1081 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC092989.1-201ENST00000481235 277 ntBASIC2.89□□□□□ -1.95
SHC1P29353 RN7SL283P-201ENST00000489055 303 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC034222.1-201ENST00000494052 532 ntBASIC2.89□□□□□ -1.95
SHC1P29353 FAM92A1P2-202ENST00000504766 877 ntBASIC2.89□□□□□ -1.95
SHC1P29353 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.89□□□□□ -1.95
SHC1P29353 Y_RNA.672-201ENST00000516289 104 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC022616.6-201ENST00000520479 119 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.89□□□□□ -1.95
SHC1P29353 AK6P1-201ENST00000540219 478 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.89□□□□□ -1.95
SHC1P29353 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.89□□□□□ -1.95
SHC1P29353 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC004520.1-201ENST00000608362 1413 ntBASIC2.89□□□□□ -1.95
SHC1P29353 OR10AB1P-201ENST00000609613 938 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AL591516.1-201ENST00000611326 274 ntBASIC2.89□□□□□ -1.95
SHC1P29353 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC073534.2-201ENST00000620377 381 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC012150.2-201ENST00000621300 544 ntBASIC2.89□□□□□ -1.95
SHC1P29353 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
SHC1P29353 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHC1P29353 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.89□□□□□ -1.95
SHC1P29353 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.89□□□□□ -1.95
SHC1P29353 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHC1P29353 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHC1P29353 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SHC1P29353 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
SHC1P29353 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.88□□□□□ -1.95
SHC1P29353 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHC1P29353 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHC1P29353 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SHC1P29353 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SHC1P29353 RNU4-1-201ENST00000363925 141 ntBASIC2.88□□□□□ -1.95
SHC1P29353 Y_RNA.234-201ENST00000364409 97 ntBASIC2.88□□□□□ -1.95
SHC1P29353 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.88□□□□□ -1.95
SHC1P29353 Y_RNA.333-201ENST00000365274 102 ntBASIC2.88□□□□□ -1.95
SHC1P29353 Y_RNA.409-201ENST00000383990 98 ntBASIC2.88□□□□□ -1.95
SHC1P29353 RNU6-761P-201ENST00000384148 107 ntBASIC2.88□□□□□ -1.95
SHC1P29353 RNU6-878P-201ENST00000384578 110 ntBASIC2.88□□□□□ -1.95
SHC1P29353 MTCO3P40-201ENST00000392516 676 ntBASIC2.88□□□□□ -1.95
SHC1P29353 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
SHC1P29353 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.88□□□□□ -1.95
SHC1P29353 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.88□□□□□ -1.95
SHC1P29353 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.88□□□□□ -1.95
SHC1P29353 PIGFP2-201ENST00000421400 651 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AL353777.1-201ENST00000425552 326 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC006548.1-201ENST00000427470 102 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC073464.1-201ENST00000429823 534 ntBASIC2.88□□□□□ -1.95
SHC1P29353 RPL31P35-201ENST00000431058 377 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC104850.1-201ENST00000435940 476 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.88□□□□□ -1.95
SHC1P29353 SETP5-201ENST00000437270 562 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.88□□□□□ -1.95
SHC1P29353 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.88□□□□□ -1.95
SHC1P29353 snoU13.24-201ENST00000458998 104 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC010285.1-201ENST00000470580 392 ntBASIC2.88□□□□□ -1.95
SHC1P29353 ST13P14-201ENST00000474095 734 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC108860.1-201ENST00000484521 383 ntBASIC2.88□□□□□ -1.95
SHC1P29353 RPL32P34-201ENST00000486380 400 ntBASIC2.88□□□□□ -1.95
SHC1P29353 AC019235.1-201ENST00000503847 207 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms