Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 HMGB1P36-201ENST00000487709 576 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AL049874.1-201ENST00000489560 388 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC021146.8-201ENST00000507455 733 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 RNU6-528P-201ENST00000516926 100 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC010376.1-201ENST00000522101 334 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 CYCSP26-201ENST00000534107 320 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DMAP28067 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DMAP28067 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC068313.1-201ENST00000604028 1008 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 MIR8057-201ENST00000620957 69 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC231657.1-201ENST00000624313 397 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AC004777.1-201ENST00000624317 287 ntBASIC2.02□□□□□ -2.09
HLA-DMAP28067 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DMAP28067 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DMAP28067 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DMAP28067 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMAP28067 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMAP28067 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMAP28067 RNU6-1122P-201ENST00000384449 107 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 RNU6-1242P-201ENST00000391052 103 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 RNU4-22P-201ENST00000411058 166 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 MTCO2P5-201ENST00000422621 426 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC236972.1-201ENST00000433225 199 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC002381.1-201ENST00000447049 280 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 RSL24D1P3-201ENST00000449255 495 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 ZNF886P-201ENST00000450781 723 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 MTND2P24-201ENST00000453434 806 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DMAP28067 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC004263.1-201ENST00000479327 332 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC114981.1-201ENST00000503897 678 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 RN7SKP24-201ENST00000515888 284 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 MIR5571-201ENST00000577998 113 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC024220.1-201ENST00000603675 484 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC025588.2-201ENST00000604851 466 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AL450336.1-201ENST00000605180 586 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC008443.7-201ENST00000622195 246 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 MIR7157-201ENST00000635801 60 ntBASIC2.01□□□□□ -2.09
HLA-DMAP28067 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DMAP28067 OR4G2P-202ENST00000641004 1759 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DMAP28067 SLC10A5P1-201ENST00000379063 1306 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMAP28067 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2□□□□□ -2.09
HLA-DMAP28067 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMAP28067 RNU5E-8P-201ENST00000363502 116 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 SNORD46.1-201ENST00000364139 104 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 Y_RNA.234-201ENST00000364409 97 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 SNORA36C-201ENST00000384289 132 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 SNORA44-201ENST00000384584 132 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 MIR27B-201ENST00000385129 97 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RNU6-750P-201ENST00000390946 107 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RPL23AP29-201ENST00000397284 453 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RNU6-1328P-201ENST00000410938 106 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC023141.4-201ENST00000412031 328 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC096649.2-201ENST00000416186 393 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 OFD1P11Y-201ENST00000418213 1177 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMAP28067 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMAP28067 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DMAP28067 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMAP28067 MTND5P14-201ENST00000441481 1267 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 CBWD4P-201ENST00000445695 655 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 EEF1E1P1-201ENST00000446998 430 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 EXOSC3P1-201ENST00000448649 500 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 MTND1P31-201ENST00000449206 961 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 LARP1BP2-201ENST00000486594 519 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RNU6-150P-201ENST00000516237 95 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 RNU6-714P-201ENST00000516963 103 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 DEFB131D-201ENST00000526803 184 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2□□□□□ -2.09
HLA-DMAP28067 AC023813.2-201ENST00000564321 469 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AL512347.1-201ENST00000566420 503 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2□□□□□ -2.09
HLA-DMAP28067 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DMAP28067 BNIP3P26-201ENST00000600827 554 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms