Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.03□□□□□ -1.76
POLR2AP24928 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
POLR2AP24928 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
POLR2AP24928 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
POLR2AP24928 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
POLR2AP24928 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR2AP24928 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.02□□□□□ -1.77
POLR2AP24928 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
POLR2AP24928 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC012065.2-201ENST00000421295 375 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC108059.2-201ENST00000434626 151 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 RPS4XP2-201ENST00000458402 793 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 Y_RNA.639-201ENST00000458981 102 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC055855.1-201ENST00000489563 579 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 HMGB3P15-201ENST00000507326 574 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 KLHL2P1-201ENST00000508691 521 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AP006245.1-201ENST00000522549 120 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AP000907.2-201ENST00000530827 353 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC023043.2-201ENST00000589678 1026 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC006023.1-201ENST00000603944 259 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL360085.1-201ENST00000604713 532 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 RNVU1-4-201ENST00000612985 164 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 BMS1P21-201ENST00000634565 365 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 TNPO1P3-201ENST00000436471 2662 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.02□□□□□ -1.77
POLR2AP24928 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
POLR2AP24928 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
POLR2AP24928 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC092079.1-201ENST00000558620 1985 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 XPOTP1-201ENST00000443317 2398 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR2AP24928 RNU6-1078P-201ENST00000364522 103 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 HLFP1-201ENST00000402375 499 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 RN7SKP58-201ENST00000411010 305 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 RPL7P28-201ENST00000437739 740 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 CBWD4P-201ENST00000445695 655 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL353691.1-201ENST00000451332 387 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 GMFBP1-201ENST00000467831 427 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC084357.1-201ENST00000473404 255 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 RPL23AP41-201ENST00000484754 458 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 Y_RNA.654-201ENST00000497848 106 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR2AP24928 AC135001.1-201ENST00000544546 283 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.02□□□□□ -1.77
POLR2AP24928 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.6-201ENST00000603753 252 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.11-201ENST00000604059 253 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC008162.1-201ENST00000604718 254 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.1-201ENST00000604752 252 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.5-201ENST00000605253 252 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.12-201ENST00000605291 253 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.8-201ENST00000605353 252 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL670379.7-201ENST00000605823 252 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AL627309.6-201ENST00000606857 840 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC138305.3-201ENST00000624988 240 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 AC130650.2-201ENST00000618736 2403 ntBASIC4.02□□□□□ -1.77
POLR2AP24928 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
POLR2AP24928 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
POLR2AP24928 AC087190.4-201ENST00000574616 8334 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.01□□□□□ -1.77
POLR2AP24928 MTND5P33-201ENST00000571250 1450 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
POLR2AP24928 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
POLR2AP24928 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
POLR2AP24928 SNORD113-7-201ENST00000363762 77 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 RNU4-48P-201ENST00000365559 182 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
POLR2AP24928 JKAMPP1-201ENST00000413804 919 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 ATG3P1-201ENST00000419507 911 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 AC048351.1-201ENST00000420064 602 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.01□□□□□ -1.77
POLR2AP24928 AL353678.1-201ENST00000422735 741 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 MTCO2P12-201ENST00000427426 682 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 NDUFB1P1-201ENST00000435191 180 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 KC877373.1-201ENST00000479066 408 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 AC027575.1-201ENST00000481064 460 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.01□□□□□ -1.77
POLR2AP24928 TMEM248P1-201ENST00000510579 951 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 RNU6-1088P-201ENST00000516850 104 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.01□□□□□ -1.77
POLR2AP24928 PSMA2P1-201ENST00000526365 646 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR2AP24928 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.01□□□□□ -1.77
POLR2AP24928 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR2AP24928 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.01□□□□□ -1.77
POLR2AP24928 AC079597.1-201ENST00000624306 508 ntBASIC4.01□□□□□ -1.77
POLR2AP24928 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms