Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 ATP5JP1-201ENST00000431631 322 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC092798.1-201ENST00000458542 409 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 snoU13.28-201ENST00000459235 104 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 RPL21P41-201ENST00000459863 264 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 RPL23AP11-201ENST00000475260 469 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC105137.1-201ENST00000484355 562 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.62□□□□□ -1.83
TNFSF4P23510 PPBPP1-201ENST00000510807 373 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 LRRC34P2-201ENST00000514850 553 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 RNA5SP401-201ENST00000515920 127 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 SNORA31.9-201ENST00000516429 84 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 SNORD60.2-201ENST00000516883 86 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFSF4P23510 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.62□□□□□ -1.83
TNFSF4P23510 MTND1P35-201ENST00000526739 508 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 AL137161.1-201ENST00000532231 390 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF4P23510 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFSF4P23510 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 MIR5692A1-201ENST00000580523 69 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 DISC2.1-201ENST00000612827 205 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TNFSF4P23510 AC079684.1-201ENST00000621405 437 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 MIR7702-201ENST00000621931 59 ntBASIC3.62□□□□□ -1.83
TNFSF4P23510 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF4P23510 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TNFSF4P23510 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 MTND5P7-201ENST00000413558 1798 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RNU1-132P-201ENST00000364300 164 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 SNORD66.1-201ENST00000391230 76 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RPS26P8-201ENST00000393490 348 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AL139039.1-201ENST00000401900 692 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AL136116.1-201ENST00000403591 381 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AL606923.1-201ENST00000406616 190 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RN7SKP285-201ENST00000410137 318 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RNU6-1025P-201ENST00000410629 104 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RNU6-193P-201ENST00000410977 107 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RAB28P1-201ENST00000411517 641 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 EEF1A1P40-201ENST00000412883 573 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RPL26P27-201ENST00000414397 437 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF4P23510 GTF2IP20-201ENST00000431663 360 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 KCTD9P3-201ENST00000434597 1169 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF4P23510 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 CALM1P1-201ENST00000442082 433 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RPL37P4-201ENST00000448908 268 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RN7SL385P-201ENST00000468873 276 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 AC026801.1-201ENST00000497178 464 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 AC104136.1-201ENST00000512969 394 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RNU4-29P-201ENST00000515943 174 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 RNA5SP519-201ENST00000516480 119 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AC015917.1-201ENST00000579654 510 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 MIR3939-201ENST00000582614 106 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AL354984.3-201ENST00000604803 325 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF4P23510 AC104458.1-201ENST00000608243 463 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 MIR6758-201ENST00000620653 63 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AL356321.1-201ENST00000621360 228 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 MIR6830-201ENST00000636015 70 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 MTND4P35-201ENST00000604257 1375 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF4P23510 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 AC010680.1-201ENST00000590024 3590 ntBASIC3.61□□□□□ -1.83
TNFSF4P23510 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF4P23510 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF4P23510 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF4P23510 HSPA8P4-201ENST00000511877 1920 ntBASIC3.6□□□□□ -1.83
TNFSF4P23510 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF4P23510 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF4P23510 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms