Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH3P22223 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH3P22223 SNORA74D-201ENST00000516404 141 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC107934.1-201ENST00000522215 217 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AP000857.1-201ENST00000532151 543 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC007536.1-201ENST00000533382 349 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH3P22223 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH3P22223 RPL21P5-201ENST00000554662 472 ntBASIC3.14□□□□□ -1.91
CDH3P22223 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH3P22223 MIR3118-1-201ENST00000581787 76 ntBASIC3.14□□□□□ -1.91
CDH3P22223 BNIP3P8-201ENST00000597863 560 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AL359999.1-201ENST00000604513 294 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC004908.2-201ENST00000609090 574 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC010678.1-201ENST00000614118 713 ntBASIC3.14□□□□□ -1.91
CDH3P22223 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC091953.5-201ENST00000622919 233 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC091953.2-201ENST00000623979 160 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC010149.2-201ENST00000637608 315 ntBASIC3.14□□□□□ -1.91
CDH3P22223 TEX21P-201ENST00000447107 1476 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC233263.6-201ENST00000631132 1963 ntBASIC3.14□□□□□ -1.91
CDH3P22223 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH3P22223 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH3P22223 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AC092104.1-201ENST00000497346 1441 ntBASIC3.13□□□□□ -1.91
CDH3P22223 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH3P22223 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDH3P22223 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH3P22223 RNU5A-8P-201ENST00000364102 114 ntBASIC3.13□□□□□ -1.91
CDH3P22223 RNU4-24P-201ENST00000364565 139 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH3P22223 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
CDH3P22223 FCF1P10-201ENST00000407590 479 ntBASIC3.13□□□□□ -1.91
CDH3P22223 RNU6-248P-201ENST00000410720 107 ntBASIC3.13□□□□□ -1.91
CDH3P22223 RPS3AP3-201ENST00000411933 242 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AC006366.1-201ENST00000422002 759 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH3P22223 TIMM9P1-201ENST00000436122 256 ntBASIC3.13□□□□□ -1.91
CDH3P22223 RPL35AP22-201ENST00000436855 335 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
CDH3P22223 MTND6P13-201ENST00000443510 523 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 AL162389.1-201ENST00000449233 177 ntBASIC3.13□□□□□ -1.91
CDH3P22223 SSXP1-201ENST00000453640 473 ntBASIC3.13□□□□□ -1.91
CDH3P22223 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 RPS29P12-201ENST00000460178 152 ntBASIC3.13□□□□□ -1.91
CDH3P22223 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH3P22223 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
CDH3P22223 RN7SL504P-201ENST00000494496 287 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH3P22223 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH3P22223 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH3P22223 AC024909.2-201ENST00000553035 286 ntBASIC3.13□□□□□ -1.91
CDH3P22223 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CDH3P22223 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH3P22223 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH3P22223 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 MIR3146-201ENST00000580367 79 ntBASIC3.13□□□□□ -1.91
CDH3P22223 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH3P22223 AC015871.2-201ENST00000603605 948 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AC131902.3-201ENST00000611767 581 ntBASIC3.13□□□□□ -1.91
CDH3P22223 AC093838.1-201ENST00000613014 469 ntBASIC3.13□□□□□ -1.91
CDH3P22223 TUG1_2.1-201ENST00000614234 87 ntBASIC3.13□□□□□ -1.91
CDH3P22223 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH3P22223 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
CDH3P22223 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH3P22223 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH3P22223 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDH3P22223 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
CDH3P22223 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
CDH3P22223 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 Y_RNA.436-201ENST00000384097 102 ntBASIC3.12□□□□□ -1.91
CDH3P22223 RNU6-348P-201ENST00000384386 107 ntBASIC3.12□□□□□ -1.91
CDH3P22223 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
CDH3P22223 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
CDH3P22223 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 CST9LP2-201ENST00000437612 320 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH3P22223 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH3P22223 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 RNU7-59P-201ENST00000459101 61 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH3P22223 ARL2BPP4-201ENST00000506854 471 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 AC079140.3-201ENST00000511111 550 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH3P22223 RNU6-56P-201ENST00000516986 93 ntBASIC3.12□□□□□ -1.91
CDH3P22223 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH3P22223 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH3P22223 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms