Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A3P12111 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 ANAPC10P1-201ENST00000395991 556 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 RPL5P19-201ENST00000404228 893 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.08□□□□□ -2.24
COL6A3P12111 AC007098.1-201ENST00000420122 367 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 RPL30P4-201ENST00000429309 333 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 AL121871.1-201ENST00000443413 436 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 AC022431.1-201ENST00000450941 438 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 RNA5SP57-201ENST00000459463 123 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 OSBPL9P3-201ENST00000534523 595 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 AP002967.1-201ENST00000624203 539 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A3P12111 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A3P12111 RNU6-203P-201ENST00000384038 104 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.08□□□□□ -2.24
COL6A3P12111 AC099336.2-201ENST00000422457 254 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 RPS20P10-201ENST00000451209 253 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 SNORA48.9-201ENST00000516419 162 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 ANP32BP3-201ENST00000559213 706 ntBASIC1.08□□□□□ -2.24
COL6A3P12111 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.07□□□□□ -2.24
COL6A3P12111 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A3P12111 OR6K5P-201ENST00000447050 945 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A3P12111 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 RPL21P93-201ENST00000480465 489 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 AC233702.1-201ENST00000482905 502 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 AC093591.1-201ENST00000491435 481 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 IGLVI-20-201ENST00000519296 130 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A3P12111 AC025918.2-201ENST00000558683 763 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COL6A3P12111 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A3P12111 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.07□□□□□ -2.24
COL6A3P12111 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A3P12111 Y_RNA.684-201ENST00000516510 99 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
COL6A3P12111 MIR203B-201ENST00000636080 86 ntBASIC1.07□□□□□ -2.24
COL6A3P12111 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL6A3P12111 Y_RNA.293-201ENST00000364908 93 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 OR1L1-202ENST00000373686 1083 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 NUP35P2-201ENST00000416748 943 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL6A3P12111 AL391261.3-201ENST00000557194 520 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.06□□□□□ -2.24
COL6A3P12111 MIR7974-201ENST00000615835 79 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
COL6A3P12111 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
COL6A3P12111 SNORA6-201ENST00000384033 151 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A3P12111 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A3P12111 MIR514B-201ENST00000516774 80 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC090897.2-201ENST00000581715 130 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL6A3P12111 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL6A3P12111 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A3P12111 RNU2-37P-201ENST00000410695 177 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 RN7SKP51-201ENST00000410781 304 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 UBE2V2P1-201ENST00000434717 398 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A3P12111 AC093801.2-201ENST00000503966 1050 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC121161.1-201ENST00000510606 652 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 RNA5SP134-201ENST00000516492 96 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A3P12111 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A3P12111 AC012443.1-201ENST00000605605 231 ntBASIC1.06□□□□□ -2.24
COL6A3P12111 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A3P12111 Y_RNA.204-201ENST00000364112 102 ntBASIC1.05□□□□□ -2.24
COL6A3P12111 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A3P12111 RPL31P63-201ENST00000422565 375 ntBASIC1.05□□□□□ -2.24
COL6A3P12111 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A3P12111 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A3P12111 RNA5SP310-201ENST00000459084 116 ntBASIC1.05□□□□□ -2.24
COL6A3P12111 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A3P12111 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.05□□□□□ -2.24
COL6A3P12111 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.05□□□□□ -2.24
COL6A3P12111 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.05□□□□□ -2.24
COL6A3P12111 RNU6-418P-201ENST00000384035 107 ntBASIC1.05□□□□□ -2.24
COL6A3P12111 AL512661.1-201ENST00000434586 1253 ntBASIC1.05□□□□□ -2.24
COL6A3P12111 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.05□□□□□ -2.24
COL6A3P12111 AL161788.1-201ENST00000441805 169 ntBASIC1.05□□□□□ -2.24
COL6A3P12111 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A3P12111 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A3P12111 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A3P12111 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A3P12111 RNA5SP295-201ENST00000362655 121 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 RNY4P7-201ENST00000364600 96 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 AC022493.1-201ENST00000492984 337 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A3P12111 NOP56P3-201ENST00000549457 385 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 MTND4LP24-201ENST00000572277 291 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A3P12111 Z69720.2-201ENST00000624755 279 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL6A3P12111 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.04□□□□□ -2.24
COL6A3P12111 AL161651.1-201ENST00000440882 223 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms