Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.97□□□□□ -2.09
CD28P10747 AC079597.1-201ENST00000624306 508 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.97□□□□□ -2.09
CD28P10747 MTND1P37-201ENST00000636562 264 ntBASIC1.97□□□□□ -2.09
CD28P10747 AC099654.9-201ENST00000637055 678 ntBASIC1.97□□□□□ -2.09
CD28P10747 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CD28P10747 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CD28P10747 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD28P10747 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD28P10747 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.96□□□□□ -2.09
CD28P10747 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CD28P10747 RNU6-777P-201ENST00000364265 104 ntBASIC1.96□□□□□ -2.1
CD28P10747 RNU6-1180P-201ENST00000364935 107 ntBASIC1.96□□□□□ -2.1
CD28P10747 DEFA7P-201ENST00000382676 285 ntBASIC1.96□□□□□ -2.1
CD28P10747 MIR518C-201ENST00000384822 101 ntBASIC1.96□□□□□ -2.1
CD28P10747 MTND4P13-201ENST00000402078 1023 ntBASIC1.96□□□□□ -2.1
CD28P10747 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.96□□□□□ -2.1
CD28P10747 NPM1P11-201ENST00000417106 855 ntBASIC1.96□□□□□ -2.1
CD28P10747 AL451054.2-201ENST00000420896 202 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 RPL7P37-201ENST00000425095 738 ntBASIC1.96□□□□□ -2.1
CD28P10747 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 UBE2D3P1-201ENST00000436669 444 ntBASIC1.96□□□□□ -2.1
CD28P10747 RSU1P2-202ENST00000437884 485 ntBASIC1.96□□□□□ -2.1
CD28P10747 FTH1P25-201ENST00000447665 469 ntBASIC1.96□□□□□ -2.1
CD28P10747 AL513124.1-201ENST00000450410 614 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.96□□□□□ -2.1
CD28P10747 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.96□□□□□ -2.1
CD28P10747 CACYBPP2-201ENST00000453625 678 ntBASIC1.96□□□□□ -2.1
CD28P10747 AP000705.1-201ENST00000454567 350 ntBASIC1.96□□□□□ -2.1
CD28P10747 RPS20P20-201ENST00000460498 340 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC087588.1-201ENST00000462203 316 ntBASIC1.96□□□□□ -2.1
CD28P10747 FAM172BP-201ENST00000487497 1089 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 AC147055.4-201ENST00000504399 745 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC010587.2-201ENST00000511727 448 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC008549.1-201ENST00000512900 643 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.96□□□□□ -2.1
CD28P10747 RNA5SP216-201ENST00000516111 123 ntBASIC1.96□□□□□ -2.1
CD28P10747 CKS1BP7-201ENST00000522230 235 ntBASIC1.96□□□□□ -2.1
CD28P10747 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.96□□□□□ -2.1
CD28P10747 MTCO1P47-201ENST00000523889 1271 ntBASIC1.96□□□□□ -2.1
CD28P10747 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CD28P10747 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.96□□□□□ -2.1
CD28P10747 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.96□□□□□ -2.1
CD28P10747 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.96□□□□□ -2.1
CD28P10747 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.96□□□□□ -2.1
CD28P10747 MIR4509-3-201ENST00000578671 94 ntBASIC1.96□□□□□ -2.1
CD28P10747 MIR4509-2-201ENST00000583920 94 ntBASIC1.96□□□□□ -2.1
CD28P10747 RPP40P2-201ENST00000603596 712 ntBASIC1.96□□□□□ -2.1
CD28P10747 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 AC106052.1-201ENST00000608029 497 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC004852.3-201ENST00000614131 326 ntBASIC1.96□□□□□ -2.1
CD28P10747 MIR4509-1-201ENST00000618224 94 ntBASIC1.96□□□□□ -2.1
CD28P10747 CR381653.2-201ENST00000624041 768 ntBASIC1.96□□□□□ -2.1
CD28P10747 AC019226.1-201ENST00000625666 515 ntBASIC1.96□□□□□ -2.1
CD28P10747 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.96□□□□□ -2.1
CD28P10747 AP003399.1-201ENST00000637534 361 ntBASIC1.96□□□□□ -2.1
CD28P10747 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CD28P10747 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CD28P10747 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CD28P10747 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 RNU6-462P-201ENST00000362659 105 ntBASIC1.95□□□□□ -2.1
CD28P10747 RNU6-223P-201ENST00000362830 107 ntBASIC1.95□□□□□ -2.1
CD28P10747 U8.2-201ENST00000363156 134 ntBASIC1.95□□□□□ -2.1
CD28P10747 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 U3.20-201ENST00000390909 217 ntBASIC1.95□□□□□ -2.1
CD28P10747 AL139095.1-201ENST00000404326 391 ntBASIC1.95□□□□□ -2.1
CD28P10747 AL513475.1-201ENST00000406602 315 ntBASIC1.95□□□□□ -2.1
CD28P10747 USP9YP33-201ENST00000412220 421 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 AL513477.1-202ENST00000417061 214 ntBASIC1.95□□□□□ -2.1
CD28P10747 RPL7L1P10-201ENST00000427790 463 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 HSFY7P-201ENST00000432672 318 ntBASIC1.95□□□□□ -2.1
CD28P10747 USP9YP35-201ENST00000435696 412 ntBASIC1.95□□□□□ -2.1
CD28P10747 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.95□□□□□ -2.1
CD28P10747 RPL35AP22-201ENST00000436855 335 ntBASIC1.95□□□□□ -2.1
CD28P10747 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 HSFY8P-201ENST00000437934 318 ntBASIC1.95□□□□□ -2.1
CD28P10747 AL049734.2-201ENST00000441066 616 ntBASIC1.95□□□□□ -2.1
CD28P10747 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 MTCYBP3-201ENST00000445588 1137 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 HSFY5P-201ENST00000453726 309 ntBASIC1.95□□□□□ -2.1
CD28P10747 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 AP1S2P1-201ENST00000457344 379 ntBASIC1.95□□□□□ -2.1
CD28P10747 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.95□□□□□ -2.1
CD28P10747 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
CD28P10747 RPL23AP45-201ENST00000476406 468 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC108729.1-201ENST00000487812 947 ntBASIC1.95□□□□□ -2.1
CD28P10747 RPS27P26-201ENST00000494583 239 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC119751.4-201ENST00000507498 357 ntBASIC1.95□□□□□ -2.1
CD28P10747 AC093809.1-201ENST00000509155 340 ntBASIC1.95□□□□□ -2.1
CD28P10747 CDC42P4-201ENST00000510507 563 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms