Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RNA5SP269-201ENST00000459032 137 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC026436.1-201ENST00000510537 270 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL5A2P05997 AC116347.2-201ENST00000514912 523 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 FABP5P5-201ENST00000515537 406 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC025881.1-201ENST00000518851 512 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC239860.2-201ENST00000525886 270 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A2P05997 AC090502.2-201ENST00000549267 280 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 PCMTD1P2-201ENST00000565017 355 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC093519.1-201ENST00000566109 298 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.16□□□□□ -1.9
COL5A2P05997 AC115085.1-201ENST00000588924 229 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC012065.4-201ENST00000602445 679 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AC098614.4-201ENST00000607601 462 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 U6atac.1-201ENST00000616025 117 ntBASIC3.16□□□□□ -1.9
COL5A2P05997 AP001486.2-201ENST00000561652 5113 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 RNU6-501P-201ENST00000364072 100 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL5A2P05997 RNU6-1042P-201ENST00000384204 107 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 RNU6-1122P-201ENST00000384449 107 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 MIR548F1-201ENST00000408667 84 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.15□□□□□ -1.91
COL5A2P05997 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.15□□□□□ -1.91
COL5A2P05997 MTND2P20-201ENST00000440805 661 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.15□□□□□ -1.91
COL5A2P05997 EEF1E1P1-201ENST00000446998 430 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 RPL18AP17-201ENST00000455326 198 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 NF1P3-201ENST00000457709 450 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 RPL23AP14-201ENST00000468281 468 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
COL5A2P05997 AC013828.1-201ENST00000481845 158 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC108860.1-201ENST00000484521 383 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC096751.1-202ENST00000502691 1067 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 RPL37P25-201ENST00000507308 276 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.15□□□□□ -1.91
COL5A2P05997 AF279873.1-201ENST00000523393 313 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.15□□□□□ -1.91
COL5A2P05997 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL5A2P05997 AL133241.1-201ENST00000556832 487 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.15□□□□□ -1.91
COL5A2P05997 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.15□□□□□ -1.91
COL5A2P05997 AC006566.1-201ENST00000608943 513 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC012531.5-201ENST00000611375 151 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AL357080.1-201ENST00000617394 239 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
COL5A2P05997 AC120349.2-201ENST00000625002 298 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AC110994.2-201ENST00000635481 492 ntBASIC3.15□□□□□ -1.91
COL5A2P05997 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.15□□□□□ -1.91
COL5A2P05997 AC117529.2-201ENST00000512159 2068 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL5A2P05997 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL5A2P05997 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL5A2P05997 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL5A2P05997 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.14□□□□□ -1.91
COL5A2P05997 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 TEX21P-201ENST00000447107 1476 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL5A2P05997 RNU6-433P-201ENST00000363216 104 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.14□□□□□ -1.91
COL5A2P05997 RNU6-723P-201ENST00000383973 107 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 RNU6-348P-201ENST00000384386 107 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SNORA51.12-201ENST00000384448 134 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SNRPEP2-201ENST00000397592 279 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 RNU2-6P-201ENST00000411404 190 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 AC109780.2-201ENST00000413467 845 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.14□□□□□ -1.91
COL5A2P05997 SSXP1-201ENST00000453640 473 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SNX5P1-201ENST00000505757 1041 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 RNU6-202P-201ENST00000515998 96 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 AC008562.1-201ENST00000521763 330 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SLC2A13P1-201ENST00000531560 322 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.14□□□□□ -1.91
COL5A2P05997 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.14□□□□□ -1.91
COL5A2P05997 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.14□□□□□ -1.91
COL5A2P05997 MIR4528-201ENST00000577763 90 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 MIR4458-201ENST00000578872 75 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 SEPT7P9-203ENST00000604116 343 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 AP002360.4-201ENST00000606980 481 ntBASIC3.14□□□□□ -1.91
COL5A2P05997 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.14□□□□□ -1.91
COL5A2P05997 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
COL5A2P05997 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
COL5A2P05997 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.13□□□□□ -1.91
COL5A2P05997 AL512646.1-201ENST00000269395 1077 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 RNU6-115P-201ENST00000364310 107 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.13□□□□□ -1.91
COL5A2P05997 AL450338.1-201ENST00000407987 512 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.13□□□□□ -1.91
COL5A2P05997 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.13□□□□□ -1.91
COL5A2P05997 MTCYBP38-201ENST00000417160 1123 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AC092634.6-201ENST00000418558 192 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.13□□□□□ -1.91
COL5A2P05997 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms