Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AF038458.1-201ENST00000588406 262 ntBASIC4.67□□□□□ -1.66
APPP05067 AC128687.2-201ENST00000609657 566 ntBASIC4.67□□□□□ -1.66
APPP05067 AL354798.1-201ENST00000622505 329 ntBASIC4.67□□□□□ -1.66
APPP05067 AC025034.2-201ENST00000623264 286 ntBASIC4.67□□□□□ -1.66
APPP05067 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.67□□□□□ -1.66
APPP05067 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
APPP05067 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
APPP05067 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
APPP05067 TAB3P1-202ENST00000452645 1634 ntBASIC4.67□□□□□ -1.66
APPP05067 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.67□□□□□ -1.66
APPP05067 AC006026.1-201ENST00000444025 1803 ntBASIC4.67□□□□□ -1.66
APPP05067 AC004972.1-201ENST00000623934 2209 ntBASIC4.66□□□□□ -1.66
APPP05067 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
APPP05067 BDP1P-201ENST00000582658 1990 ntBASIC4.66□□□□□ -1.66
APPP05067 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APPP05067 RNU6-845P-201ENST00000362578 103 ntBASIC4.66□□□□□ -1.66
APPP05067 Y_RNA.142-201ENST00000363491 102 ntBASIC4.66□□□□□ -1.66
APPP05067 Y_RNA.263-201ENST00000364659 114 ntBASIC4.66□□□□□ -1.66
APPP05067 SNORD115-7-201ENST00000365306 82 ntBASIC4.66□□□□□ -1.66
APPP05067 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.66□□□□□ -1.66
APPP05067 RNU6-38P-201ENST00000384085 107 ntBASIC4.66□□□□□ -1.66
APPP05067 MIR30B-201ENST00000384850 88 ntBASIC4.66□□□□□ -1.66
APPP05067 SOD2P1-201ENST00000396543 562 ntBASIC4.66□□□□□ -1.66
APPP05067 AL359634.1-202ENST00000404721 284 ntBASIC4.66□□□□□ -1.66
APPP05067 AL356432.1-201ENST00000405809 419 ntBASIC4.66□□□□□ -1.66
APPP05067 AC092809.3-201ENST00000415453 231 ntBASIC4.66□□□□□ -1.66
APPP05067 MTND4P28-201ENST00000426217 387 ntBASIC4.66□□□□□ -1.66
APPP05067 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.66□□□□□ -1.66
APPP05067 MTCO3P45-201ENST00000443036 613 ntBASIC4.66□□□□□ -1.66
APPP05067 MRPL50P4-201ENST00000446432 475 ntBASIC4.66□□□□□ -1.66
APPP05067 RNU6-333P-201ENST00000459117 107 ntBASIC4.66□□□□□ -1.66
APPP05067 CCDC34P1-201ENST00000507441 517 ntBASIC4.66□□□□□ -1.66
APPP05067 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.66□□□□□ -1.66
APPP05067 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
APPP05067 RNU6-390P-201ENST00000516259 103 ntBASIC4.66□□□□□ -1.66
APPP05067 AC087369.1-201ENST00000520775 996 ntBASIC4.66□□□□□ -1.66
APPP05067 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.66□□□□□ -1.66
APPP05067 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.66□□□□□ -1.66
APPP05067 GLYCAM1-201ENST00000546596 285 ntBASIC4.66□□□□□ -1.66
APPP05067 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.66□□□□□ -1.66
APPP05067 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.66□□□□□ -1.66
APPP05067 HSPE1P5-201ENST00000561489 272 ntBASIC4.66□□□□□ -1.66
APPP05067 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.66□□□□□ -1.66
APPP05067 RPL23AP84-201ENST00000571193 464 ntBASIC4.66□□□□□ -1.66
APPP05067 MIR4703-201ENST00000577728 79 ntBASIC4.66□□□□□ -1.66
APPP05067 AC006270.2-201ENST00000578523 652 ntBASIC4.66□□□□□ -1.66
APPP05067 MIR5685-201ENST00000579080 79 ntBASIC4.66□□□□□ -1.66
APPP05067 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.66□□□□□ -1.66
APPP05067 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.66□□□□□ -1.66
APPP05067 AL022099.1-201ENST00000604551 712 ntBASIC4.66□□□□□ -1.66
APPP05067 AC021646.1-201ENST00000605469 484 ntBASIC4.66□□□□□ -1.66
APPP05067 AC007619.2-201ENST00000605743 379 ntBASIC4.66□□□□□ -1.66
APPP05067 RNU6-89P-201ENST00000606519 100 ntBASIC4.66□□□□□ -1.66
APPP05067 AC009248.2-201ENST00000619826 254 ntBASIC4.66□□□□□ -1.66
APPP05067 FP236240.3-201ENST00000623061 327 ntBASIC4.66□□□□□ -1.66
APPP05067 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.66□□□□□ -1.66
APPP05067 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.66□□□□□ -1.66
APPP05067 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
APPP05067 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
APPP05067 AP001148.1-201ENST00000624124 2359 ntBASIC4.65□□□□□ -1.66
APPP05067 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.65□□□□□ -1.66
APPP05067 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
APPP05067 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
APPP05067 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
APPP05067 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
APPP05067 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.65□□□□□ -1.67
APPP05067 RNU2-43P-201ENST00000410306 190 ntBASIC4.65□□□□□ -1.67
APPP05067 PPP1R11P2-201ENST00000423543 382 ntBASIC4.65□□□□□ -1.67
APPP05067 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.65□□□□□ -1.67
APPP05067 SRIP2-201ENST00000428470 166 ntBASIC4.65□□□□□ -1.67
APPP05067 RPL35AP22-201ENST00000436855 335 ntBASIC4.65□□□□□ -1.67
APPP05067 AC083863.1-201ENST00000438811 231 ntBASIC4.65□□□□□ -1.67
APPP05067 ELOCP23-201ENST00000452014 332 ntBASIC4.65□□□□□ -1.67
APPP05067 RNU7-182P-201ENST00000459009 62 ntBASIC4.65□□□□□ -1.67
APPP05067 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.65□□□□□ -1.67
APPP05067 AC092451.1-201ENST00000480211 153 ntBASIC4.65□□□□□ -1.67
APPP05067 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.65□□□□□ -1.67
APPP05067 MTND3P22-201ENST00000510932 243 ntBASIC4.65□□□□□ -1.67
APPP05067 AC026726.1-201ENST00000512859 601 ntBASIC4.65□□□□□ -1.67
APPP05067 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.65□□□□□ -1.67
APPP05067 RNU4-29P-201ENST00000515943 174 ntBASIC4.65□□□□□ -1.67
APPP05067 SNORD60.2-201ENST00000516883 86 ntBASIC4.65□□□□□ -1.67
APPP05067 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.65□□□□□ -1.67
APPP05067 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.65□□□□□ -1.67
APPP05067 AC022695.1-201ENST00000522089 237 ntBASIC4.65□□□□□ -1.67
APPP05067 MIR4795-201ENST00000584182 89 ntBASIC4.65□□□□□ -1.67
APPP05067 AC005261.5-201ENST00000596280 355 ntBASIC4.65□□□□□ -1.67
APPP05067 CTHRC1P1-201ENST00000605383 469 ntBASIC4.65□□□□□ -1.67
APPP05067 AC135507.2-201ENST00000612443 309 ntBASIC4.65□□□□□ -1.67
APPP05067 U6.98-201ENST00000637157 84 ntBASIC4.65□□□□□ -1.67
APPP05067 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
APPP05067 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
APPP05067 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
APPP05067 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
APPP05067 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
APPP05067 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
APPP05067 Y_RNA.58-201ENST00000362807 102 ntBASIC4.64□□□□□ -1.67
APPP05067 Y_RNA.154-201ENST00000363624 102 ntBASIC4.64□□□□□ -1.67
APPP05067 RNY3P1-201ENST00000365085 102 ntBASIC4.64□□□□□ -1.67
APPP05067 RNU4-66P-201ENST00000365199 138 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms