Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC022447.1-201ENST00000515358 464 ntBASIC3.11□□□□□ -1.91
VTNP04004 RNU6-1003P-201ENST00000517099 105 ntBASIC3.11□□□□□ -1.91
VTNP04004 AC022878.1-201ENST00000530684 149 ntBASIC3.11□□□□□ -1.91
VTNP04004 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.11□□□□□ -1.91
VTNP04004 AL157394.1-201ENST00000562983 1224 ntBASIC3.11□□□□□ -1.91
VTNP04004 UBE2L4-201ENST00000587688 464 ntBASIC3.11□□□□□ -1.91
VTNP04004 AP001029.3-201ENST00000588063 596 ntBASIC3.11□□□□□ -1.91
VTNP04004 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
VTNP04004 AC006254.3-201ENST00000603353 884 ntBASIC3.11□□□□□ -1.91
VTNP04004 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
VTNP04004 AC064872.1-201ENST00000604823 1072 ntBASIC3.11□□□□□ -1.91
VTNP04004 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.11□□□□□ -1.91
VTNP04004 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.11□□□□□ -1.91
VTNP04004 AL158801.5-201ENST00000623123 465 ntBASIC3.11□□□□□ -1.91
VTNP04004 AC068137.4-201ENST00000638485 296 ntBASIC3.11□□□□□ -1.91
VTNP04004 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VTNP04004 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VTNP04004 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VTNP04004 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
VTNP04004 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.11□□□□□ -1.91
VTNP04004 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
VTNP04004 MTND5P33-201ENST00000571250 1450 ntBASIC3.1□□□□□ -1.91
VTNP04004 RNU6-173P-201ENST00000364215 104 ntBASIC3.1□□□□□ -1.91
VTNP04004 RNU4-24P-201ENST00000364565 139 ntBASIC3.1□□□□□ -1.91
VTNP04004 RNU6-882P-201ENST00000391025 103 ntBASIC3.1□□□□□ -1.91
VTNP04004 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 Y_RNA.608-201ENST00000410647 95 ntBASIC3.1□□□□□ -1.91
VTNP04004 RNA5SP184-201ENST00000411071 108 ntBASIC3.1□□□□□ -1.91
VTNP04004 RNU6-516P-201ENST00000411381 104 ntBASIC3.1□□□□□ -1.91
VTNP04004 HMGN1P14-201ENST00000412459 517 ntBASIC3.1□□□□□ -1.91
VTNP04004 CCDC58P2-201ENST00000417131 366 ntBASIC3.1□□□□□ -1.91
VTNP04004 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.1□□□□□ -1.91
VTNP04004 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.1□□□□□ -1.91
VTNP04004 NUP35P1-201ENST00000422734 947 ntBASIC3.1□□□□□ -1.91
VTNP04004 ARF4P2-201ENST00000430209 526 ntBASIC3.1□□□□□ -1.91
VTNP04004 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
VTNP04004 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.1□□□□□ -1.91
VTNP04004 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
VTNP04004 SSXP1-201ENST00000453640 473 ntBASIC3.1□□□□□ -1.91
VTNP04004 RPL21P8-201ENST00000465083 535 ntBASIC3.1□□□□□ -1.91
VTNP04004 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
VTNP04004 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.1□□□□□ -1.91
VTNP04004 MTND3P5-201ENST00000512798 333 ntBASIC3.1□□□□□ -1.91
VTNP04004 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.1□□□□□ -1.91
VTNP04004 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 AC123904.2-201ENST00000548059 300 ntBASIC3.1□□□□□ -1.91
VTNP04004 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 AC005771.1-201ENST00000585581 349 ntBASIC3.1□□□□□ -1.91
VTNP04004 AP001429.1-201ENST00000602568 530 ntBASIC3.1□□□□□ -1.91
VTNP04004 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.1□□□□□ -1.91
VTNP04004 AP000254.1-201ENST00000609934 520 ntBASIC3.1□□□□□ -1.91
VTNP04004 AC092656.1-203ENST00000624134 423 ntBASIC3.1□□□□□ -1.91
VTNP04004 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.1□□□□□ -1.91
VTNP04004 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
VTNP04004 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VTNP04004 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VTNP04004 AC009902.3-201ENST00000606235 2172 ntBASIC3.1□□□□□ -1.91
VTNP04004 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.09□□□□□ -1.91
VTNP04004 TEX21P-201ENST00000447107 1476 ntBASIC3.09□□□□□ -1.91
VTNP04004 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VTNP04004 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
VTNP04004 Y_RNA.194-201ENST00000363985 102 ntBASIC3.09□□□□□ -1.91
VTNP04004 RNU4-91P-201ENST00000364778 135 ntBASIC3.09□□□□□ -1.91
VTNP04004 Y_RNA.559-201ENST00000384686 107 ntBASIC3.09□□□□□ -1.91
VTNP04004 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VTNP04004 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.09□□□□□ -1.91
VTNP04004 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.09□□□□□ -1.91
VTNP04004 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VTNP04004 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.09□□□□□ -1.91
VTNP04004 HMGB3P23-201ENST00000414981 585 ntBASIC3.09□□□□□ -1.91
VTNP04004 SPA17P1-201ENST00000416656 452 ntBASIC3.09□□□□□ -1.91
VTNP04004 RPL21P32-201ENST00000419877 477 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC006366.1-201ENST00000422002 759 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC233728.2-201ENST00000425348 757 ntBASIC3.09□□□□□ -1.91
VTNP04004 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.09□□□□□ -1.91
VTNP04004 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.09□□□□□ -1.91
VTNP04004 AC004866.2-201ENST00000438285 481 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.09□□□□□ -1.91
VTNP04004 AL121871.1-201ENST00000443413 436 ntBASIC3.09□□□□□ -1.91
VTNP04004 RPL17P49-201ENST00000443728 411 ntBASIC3.09□□□□□ -1.91
VTNP04004 AL033528.1-201ENST00000453780 140 ntBASIC3.09□□□□□ -1.91
VTNP04004 SNRPFP4-201ENST00000456366 242 ntBASIC3.09□□□□□ -1.91
VTNP04004 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
VTNP04004 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
VTNP04004 snoU109.1-201ENST00000459339 135 ntBASIC3.09□□□□□ -1.91
VTNP04004 RAP1BP2-201ENST00000478270 544 ntBASIC3.09□□□□□ -1.91
VTNP04004 MTND1P3-201ENST00000484956 952 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC022616.6-201ENST00000520479 119 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
VTNP04004 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.09□□□□□ -1.91
VTNP04004 AP003181.2-201ENST00000528941 181 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC125611.2-201ENST00000551907 647 ntBASIC3.09□□□□□ -1.91
VTNP04004 AL391156.1-201ENST00000554965 554 ntBASIC3.09□□□□□ -1.91
VTNP04004 MIR3162-201ENST00000581818 82 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC009977.1-201ENST00000586015 570 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.09□□□□□ -1.91
VTNP04004 AL359999.1-201ENST00000604513 294 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms