Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC090616.3-201ENST00000582184 217 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.74□□□□□ -2.13
COL1A1P02452 AC025588.4-201ENST00000615802 908 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 AC087359.1-201ENST00000508335 1740 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.73□□□□□ -2.13
COL1A1P02452 AC016716.1-201ENST00000265882 708 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 RNU4-51P-201ENST00000364206 140 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 RNU6-1074P-201ENST00000383995 104 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 MIR598-201ENST00000384868 97 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 SSXP10-201ENST00000402595 565 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 MIR1304-201ENST00000408243 91 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.73□□□□□ -2.13
COL1A1P02452 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.73□□□□□ -2.13
COL1A1P02452 RPL36P19-201ENST00000430744 301 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 AL512661.1-201ENST00000434586 1253 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.73□□□□□ -2.13
COL1A1P02452 AL359385.1-201ENST00000456509 365 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 AC004223.1-201ENST00000479840 271 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.73□□□□□ -2.13
COL1A1P02452 AL137100.2-201ENST00000555786 315 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.73□□□□□ -2.13
COL1A1P02452 MIR3609-201ENST00000582661 80 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 uc_338.12-201ENST00000616344 181 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 MIR203B-201ENST00000636080 86 ntBASIC1.73□□□□□ -2.13
COL1A1P02452 OR4G11P-202ENST00000642116 1414 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 AL513185.3-201ENST00000433335 1300 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL1A1P02452 RNU6-339P-201ENST00000384310 107 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 TATDN1P1-201ENST00000414123 891 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.72□□□□□ -2.13
COL1A1P02452 AC099677.1-201ENST00000420575 175 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 AC004865.1-201ENST00000442276 1003 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 AL139109.1-201ENST00000455491 297 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 RPL31P41-201ENST00000477967 372 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.72□□□□□ -2.13
COL1A1P02452 CBX3P3-201ENST00000508108 532 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 AP004607.1-201ENST00000524456 203 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.72□□□□□ -2.13
COL1A1P02452 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.72□□□□□ -2.13
COL1A1P02452 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.72□□□□□ -2.13
COL1A1P02452 AC008015.1-201ENST00000555505 465 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 DDX10P1-201ENST00000448545 1933 ntBASIC1.72□□□□□ -2.13
COL1A1P02452 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
COL1A1P02452 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.71□□□□□ -2.14
COL1A1P02452 Y_RNA.30-201ENST00000362572 97 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 U8.1-201ENST00000362843 134 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 RNU1-105P-201ENST00000363470 161 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 RNU6-670P-201ENST00000364312 104 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 MIR493-201ENST00000385254 89 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.71□□□□□ -2.14
COL1A1P02452 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.71□□□□□ -2.14
COL1A1P02452 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL1A1P02452 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.71□□□□□ -2.14
COL1A1P02452 UBE2V1P13-201ENST00000436983 439 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AC009296.1-201ENST00000443146 155 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.71□□□□□ -2.14
COL1A1P02452 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AL136380.1-201ENST00000447970 162 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.71□□□□□ -2.14
COL1A1P02452 AL135752.1-201ENST00000479477 471 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.71□□□□□ -2.14
COL1A1P02452 MTCYBP18-201ENST00000501056 747 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AC025459.1-201ENST00000504072 156 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 PCNAP1-201ENST00000505363 709 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.71□□□□□ -2.14
COL1A1P02452 C1DP5-201ENST00000525775 383 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.71□□□□□ -2.14
COL1A1P02452 FAM60BP-201ENST00000578364 658 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 MIR3117-201ENST00000584034 78 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AC013468.1-201ENST00000608680 598 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 MIR6078-201ENST00000611069 100 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.71□□□□□ -2.14
COL1A1P02452 MTND2P41-201ENST00000637599 773 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AC009812.4-201ENST00000569134 1805 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 AC123912.3-201ENST00000600907 1367 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
COL1A1P02452 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.71□□□□□ -2.14
COL1A1P02452 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL1A1P02452 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
COL1A1P02452 AC011477.1-204ENST00000623416 1325 ntBASIC1.71□□□□□ -2.14
COL1A1P02452 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.7□□□□□ -2.14
COL1A1P02452 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL1A1P02452 SNORA6-201ENST00000384033 151 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 RNU6-1226P-201ENST00000384317 107 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 AC097499.1-201ENST00000444277 208 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.7□□□□□ -2.14
COL1A1P02452 RPS27P26-201ENST00000494583 239 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 AC008885.2-201ENST00000509506 930 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 SNORA31.18-201ENST00000517043 134 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.7□□□□□ -2.14
COL1A1P02452 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.7□□□□□ -2.14
COL1A1P02452 MIR4658-201ENST00000584344 65 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 MIR3660-201ENST00000584845 100 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 RPS15AP11-201ENST00000594193 385 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 MIR6840-201ENST00000611937 71 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.7□□□□□ -2.14
COL1A1P02452 UCA1.1-201ENST00000620952 75 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 MTCO1P4-201ENST00000520516 1409 ntBASIC1.7□□□□□ -2.14
COL1A1P02452 AL596028.1-201ENST00000326971 197 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms