Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 NCAPGP2-201ENST00000557911 754 ntBASIC3.36□□□□□ -1.87
LDLRP01130 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.36□□□□□ -1.87
LDLRP01130 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.36□□□□□ -1.87
LDLRP01130 AC012182.1-201ENST00000570133 895 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
LDLRP01130 FAM60BP-201ENST00000578364 658 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AL391813.2-201ENST00000609113 322 ntBASIC3.36□□□□□ -1.87
LDLRP01130 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.36□□□□□ -1.87
LDLRP01130 AC091834.1-201ENST00000614543 472 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AL355365.1-201ENST00000616480 294 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC006338.1-201ENST00000618453 749 ntBASIC3.36□□□□□ -1.87
LDLRP01130 MIR8057-201ENST00000620957 69 ntBASIC3.36□□□□□ -1.87
LDLRP01130 CR381653.2-201ENST00000624041 768 ntBASIC3.36□□□□□ -1.87
LDLRP01130 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
LDLRP01130 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDLRP01130 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LDLRP01130 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
LDLRP01130 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LDLRP01130 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDLRP01130 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDLRP01130 GNG5P1-201ENST00000255500 204 ntBASIC3.35□□□□□ -1.87
LDLRP01130 RNU1-33P-201ENST00000364249 162 ntBASIC3.35□□□□□ -1.87
LDLRP01130 RNU6-805P-201ENST00000365643 106 ntBASIC3.35□□□□□ -1.87
LDLRP01130 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
LDLRP01130 U3.26-201ENST00000391236 204 ntBASIC3.35□□□□□ -1.87
LDLRP01130 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDLRP01130 RPL7P25-201ENST00000404151 721 ntBASIC3.35□□□□□ -1.87
LDLRP01130 FCF1P10-201ENST00000407590 479 ntBASIC3.35□□□□□ -1.87
LDLRP01130 RNU2-43P-201ENST00000410306 190 ntBASIC3.35□□□□□ -1.87
LDLRP01130 HMGN1P14-201ENST00000412459 517 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.35□□□□□ -1.87
LDLRP01130 AC233728.2-201ENST00000425348 757 ntBASIC3.35□□□□□ -1.87
LDLRP01130 HMGN2P20-201ENST00000437531 273 ntBASIC3.35□□□□□ -1.87
LDLRP01130 FTH1P1-201ENST00000437933 532 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC098614.3-201ENST00000438957 440 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC244505.5-201ENST00000443639 207 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.35□□□□□ -1.87
LDLRP01130 Z99127.3-201ENST00000448158 395 ntBASIC3.35□□□□□ -1.87
LDLRP01130 NFU1P2-201ENST00000448700 469 ntBASIC3.35□□□□□ -1.87
LDLRP01130 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.35□□□□□ -1.87
LDLRP01130 UBDP1-202ENST00000457888 382 ntBASIC3.35□□□□□ -1.87
LDLRP01130 UBE2DNL-203ENST00000474922 222 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC092989.1-201ENST00000481235 277 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC055855.1-201ENST00000489563 579 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC069439.1-201ENST00000494739 167 ntBASIC3.35□□□□□ -1.87
LDLRP01130 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDLRP01130 AC098799.2-201ENST00000509466 868 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.35□□□□□ -1.87
LDLRP01130 AC022483.1-201ENST00000514020 567 ntBASIC3.35□□□□□ -1.87
LDLRP01130 RNU6-507P-201ENST00000516045 100 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AP001646.1-201ENST00000527936 915 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC109635.3-201ENST00000529536 185 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC104383.1-201ENST00000530297 370 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC026333.2-201ENST00000542164 106 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.35□□□□□ -1.87
LDLRP01130 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AL157394.1-201ENST00000562983 1224 ntBASIC3.35□□□□□ -1.87
LDLRP01130 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
LDLRP01130 MIR3913-1-201ENST00000577744 102 ntBASIC3.35□□□□□ -1.87
LDLRP01130 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.35□□□□□ -1.87
LDLRP01130 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.35□□□□□ -1.87
LDLRP01130 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.35□□□□□ -1.87
LDLRP01130 AC068790.3-201ENST00000602988 553 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AP001330.4-201ENST00000604350 154 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC008945.2-201ENST00000606056 604 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AL590282.1-201ENST00000610379 1136 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC009159.1-201ENST00000618386 642 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC093648.1-201ENST00000623546 606 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AL159972.1-201ENST00000625150 448 ntBASIC3.35□□□□□ -1.87
LDLRP01130 MIR3688-2-201ENST00000636963 87 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC010149.2-201ENST00000637608 315 ntBASIC3.35□□□□□ -1.87
LDLRP01130 AC119674.1-207ENST00000641355 633 ntBASIC3.35□□□□□ -1.87
LDLRP01130 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDLRP01130 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.35□□□□□ -1.87
LDLRP01130 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDLRP01130 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
LDLRP01130 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDLRP01130 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
LDLRP01130 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
LDLRP01130 SNORA72.1-201ENST00000363485 129 ntBASIC3.34□□□□□ -1.87
LDLRP01130 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
LDLRP01130 RNU4-12P-201ENST00000365233 139 ntBASIC3.34□□□□□ -1.87
LDLRP01130 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LDLRP01130 RNU6-882P-201ENST00000391025 103 ntBASIC3.34□□□□□ -1.87
LDLRP01130 RPL7P60-201ENST00000397636 735 ntBASIC3.34□□□□□ -1.87
LDLRP01130 FGF7P8-201ENST00000402994 292 ntBASIC3.34□□□□□ -1.87
LDLRP01130 CIR1P3-201ENST00000405137 479 ntBASIC3.34□□□□□ -1.87
LDLRP01130 RNU6-516P-201ENST00000411381 104 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.34□□□□□ -1.87
LDLRP01130 AC138393.2-201ENST00000414742 246 ntBASIC3.34□□□□□ -1.87
LDLRP01130 HMGB3P23-201ENST00000414981 585 ntBASIC3.34□□□□□ -1.87
LDLRP01130 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 AC005326.1-201ENST00000429197 123 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 MTND5P20-201ENST00000448677 143 ntBASIC3.34□□□□□ -1.87
LDLRP01130 SSXP4-201ENST00000451349 245 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms