Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.2□□□□□ -1.74
CNOT4O95628 DYNLL1P5-201ENST00000467158 270 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 RN7SL432P-201ENST00000484057 298 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.2□□□□□ -1.74
CNOT4O95628 RNA5SP249-201ENST00000516127 99 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC134698.5-201ENST00000519444 336 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 HMGN1P28-201ENST00000521340 364 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 DEFB108D-201ENST00000527787 222 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC023442.1-201ENST00000531247 422 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AP002404.1-201ENST00000532005 451 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MTCO3P23-201ENST00000561363 289 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 FAM60BP-201ENST00000578364 658 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC008521.1-201ENST00000587471 187 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 BNIP3P16-201ENST00000589779 534 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC006254.3-201ENST00000603353 884 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC025946.2-201ENST00000603398 234 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 ATP1B3P1-201ENST00000605365 821 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.2□□□□□ -1.74
CNOT4O95628 AC011890.2-201ENST00000613393 294 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 FAM157A-202ENST00000615155 405 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MIR6128-201ENST00000615528 109 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 PISRT1.1-201ENST00000616930 107 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AL022401.1-201ENST00000619498 108 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MIR6853-201ENST00000619642 74 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AL360181.4-201ENST00000621752 134 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AF117829.1-206ENST00000621883 3802 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.2□□□□□ -1.74
CNOT4O95628 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.2□□□□□ -1.74
CNOT4O95628 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNOT4O95628 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 AC116096.1-201ENST00000566804 2314 ntBASIC4.2□□□□□ -1.74
CNOT4O95628 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNOT4O95628 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CNOT4O95628 MAPK10-303ENST00000641324 3959 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNOT4O95628 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CNOT4O95628 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CNOT4O95628 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.19□□□□□ -1.74
CNOT4O95628 RNU6-1155P-201ENST00000363554 107 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 RNU6-784P-201ENST00000384330 106 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 RNU6-754P-201ENST00000391166 107 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.19□□□□□ -1.74
CNOT4O95628 AL645608.4-201ENST00000423619 154 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.19□□□□□ -1.74
CNOT4O95628 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.19□□□□□ -1.74
CNOT4O95628 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.19□□□□□ -1.74
CNOT4O95628 CEACAMP4-201ENST00000457676 421 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 RPL7AP28-201ENST00000464513 571 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.19□□□□□ -1.74
CNOT4O95628 HMGB1P30-201ENST00000492455 606 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC015911.1-201ENST00000495111 156 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.19□□□□□ -1.74
CNOT4O95628 RBBP4P6-201ENST00000508098 202 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC116337.1-201ENST00000509680 687 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.19□□□□□ -1.74
CNOT4O95628 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.19□□□□□ -1.74
CNOT4O95628 Y_RNA.661-201ENST00000516003 99 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 SNORA70.14-201ENST00000516205 110 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.19□□□□□ -1.74
CNOT4O95628 AC100870.1-201ENST00000522035 505 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 IGKV2D-19-201ENST00000523346 262 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.19□□□□□ -1.74
CNOT4O95628 AC090115.3-201ENST00000553218 849 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL121576.1-201ENST00000556055 276 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.19□□□□□ -1.74
CNOT4O95628 MIR4277-201ENST00000578298 84 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL670379.6-201ENST00000603753 252 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC008162.1-201ENST00000604718 254 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL670379.1-201ENST00000604752 252 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL670379.5-201ENST00000605253 252 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL670379.8-201ENST00000605353 252 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AL670379.7-201ENST00000605823 252 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 U2.17-201ENST00000611454 95 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 ATP5A1P2-202ENST00000616464 443 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 MIR8069-1-201ENST00000616627 86 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 MIR8069-2-201ENST00000621412 86 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 AC092608.2-201ENST00000624427 218 ntBASIC4.19□□□□□ -1.74
CNOT4O95628 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNOT4O95628 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.19□□□□□ -1.74
CNOT4O95628 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.19□□□□□ -1.74
CNOT4O95628 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNOT4O95628 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
CNOT4O95628 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNOT4O95628 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.18□□□□□ -1.74
CNOT4O95628 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNOT4O95628 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNOT4O95628 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNOT4O95628 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNOT4O95628 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CNOT4O95628 RN7SKP227-201ENST00000364445 330 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 SNORD6-201ENST00000365444 73 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CNOT4O95628 RNU6-637P-201ENST00000384050 107 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 RNY1P14-201ENST00000384426 108 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 SDHCP2-201ENST00000398565 501 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AP000580.1-201ENST00000404439 358 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 RPL21P24-201ENST00000413752 448 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 CYP4F29P-201ENST00000420685 446 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms