Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2□□□□□ -2.09
UPK1BO75841 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2□□□□□ -2.09
UPK1BO75841 AC026427.2-201ENST00000506228 536 ntBASIC2□□□□□ -2.09
UPK1BO75841 AC021146.8-201ENST00000507455 733 ntBASIC2□□□□□ -2.09
UPK1BO75841 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2□□□□□ -2.09
UPK1BO75841 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2□□□□□ -2.09
UPK1BO75841 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
UPK1BO75841 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
UPK1BO75841 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
UPK1BO75841 BTF3P12-201ENST00000519620 469 ntBASIC2□□□□□ -2.09
UPK1BO75841 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2□□□□□ -2.09
UPK1BO75841 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2□□□□□ -2.09
UPK1BO75841 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2□□□□□ -2.09
UPK1BO75841 MTCO2P15-201ENST00000532655 656 ntBASIC2□□□□□ -2.09
UPK1BO75841 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2□□□□□ -2.09
UPK1BO75841 CYCSP39-201ENST00000565821 309 ntBASIC2□□□□□ -2.09
UPK1BO75841 AC023824.2-201ENST00000566185 400 ntBASIC2□□□□□ -2.09
UPK1BO75841 AC060771.1-201ENST00000582031 164 ntBASIC2□□□□□ -2.09
UPK1BO75841 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2□□□□□ -2.09
UPK1BO75841 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2□□□□□ -2.09
UPK1BO75841 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2□□□□□ -2.09
UPK1BO75841 AC090186.1-201ENST00000605991 572 ntBASIC2□□□□□ -2.09
UPK1BO75841 AC135507.1-201ENST00000607214 561 ntBASIC2□□□□□ -2.09
UPK1BO75841 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
UPK1BO75841 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2□□□□□ -2.09
UPK1BO75841 ZNF658B-202ENST00000615961 3375 ntBASIC2□□□□□ -2.09
UPK1BO75841 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
UPK1BO75841 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2□□□□□ -2.09
UPK1BO75841 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2□□□□□ -2.09
UPK1BO75841 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1BO75841 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1BO75841 MTND5P1-201ENST00000445440 1375 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1BO75841 RNU6-853P-201ENST00000364306 107 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 MIR9-1-201ENST00000385198 89 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 USP9YP33-201ENST00000412220 421 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 HMGB1P49-201ENST00000418882 569 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AL109913.1-201ENST00000421173 514 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 SKA2P1-201ENST00000425592 390 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK1BO75841 USP9YP35-201ENST00000435696 412 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 RPL35AP22-201ENST00000436855 335 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 SDR42E1P3-201ENST00000438345 502 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 MTCO3P45-201ENST00000443036 613 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.99□□□□□ -2.09
UPK1BO75841 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC108729.1-201ENST00000487812 947 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 RN7SL504P-201ENST00000494496 287 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 SNORA31.6-201ENST00000516241 130 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC010376.1-201ENST00000522101 334 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK1BO75841 AC135628.1-201ENST00000568867 534 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1BO75841 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC021171.1-201ENST00000603137 706 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 DPPA3P3-201ENST00000603842 430 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC098657.3-201ENST00000620434 263 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UPK1BO75841 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC010889.1-201ENST00000566193 2666 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 AC009902.3-201ENST00000606235 2172 ntBASIC1.99□□□□□ -2.09
UPK1BO75841 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1BO75841 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
UPK1BO75841 MTND4P27-201ENST00000450813 1354 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UPK1BO75841 AC016717.2-201ENST00000609089 5141 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UPK1BO75841 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UPK1BO75841 RNU6-621P-201ENST00000364752 109 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 MIR218-1-201ENST00000384999 110 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UPK1BO75841 U3.26-201ENST00000391236 204 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AL136310.1-201ENST00000404926 654 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 HMGB1P11-201ENST00000413899 637 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1BO75841 MYL8P-204ENST00000431574 518 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AL159987.2-201ENST00000432754 307 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AC087499.2-201ENST00000432861 149 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 RPS25P9-201ENST00000435591 252 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 SNRPEP7-201ENST00000438350 220 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1BO75841 AC007327.1-201ENST00000447461 264 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AC008481.1-201ENST00000463278 396 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AC109486.1-201ENST00000486833 374 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 HIGD1AP13-201ENST00000509878 289 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AC079395.1-201ENST00000510981 262 ntBASIC1.98□□□□□ -2.09
UPK1BO75841 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms