Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.68□□□□□ -1.82
CCNT1O60563 Z75741.1-201ENST00000446793 314 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.68□□□□□ -1.82
CCNT1O60563 Z99127.3-201ENST00000448158 395 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC140076.1-201ENST00000449897 361 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC008481.1-201ENST00000463278 396 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 MTCO2P29-201ENST00000465212 189 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 RPS4XP22-201ENST00000480755 780 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 RPL32P34-201ENST00000486380 400 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.68□□□□□ -1.82
CCNT1O60563 AC110794.1-201ENST00000505816 425 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCNT1O60563 SCARNA24.1-201ENST00000516465 137 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.68□□□□□ -1.82
CCNT1O60563 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCNT1O60563 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCNT1O60563 SUB1P2-201ENST00000556401 297 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.68□□□□□ -1.82
CCNT1O60563 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.68□□□□□ -1.82
CCNT1O60563 SNORD84-203ENST00000584275 78 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.68□□□□□ -1.82
CCNT1O60563 AC107304.1-201ENST00000604229 296 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC008277.2-201ENST00000605196 797 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC126118.1-201ENST00000607744 628 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AL360181.4-201ENST00000621752 134 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 AC048347.1-201ENST00000624621 427 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.68□□□□□ -1.82
CCNT1O60563 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.68□□□□□ -1.82
CCNT1O60563 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.68□□□□□ -1.82
CCNT1O60563 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CCNT1O60563 DDX10P1-201ENST00000448545 1933 ntBASIC3.68□□□□□ -1.82
CCNT1O60563 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.67□□□□□ -1.82
CCNT1O60563 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CCNT1O60563 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 Y_RNA.409-201ENST00000383990 98 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 RNU6-76P-201ENST00000384060 104 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 Y_RNA.554-201ENST00000384672 102 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 RNU6-780P-201ENST00000391030 104 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 RNU4-55P-201ENST00000410731 137 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 RNA5SP31-201ENST00000411144 127 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.67□□□□□ -1.82
CCNT1O60563 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.67□□□□□ -1.82
CCNT1O60563 RPS15AP9-201ENST00000439856 381 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.67□□□□□ -1.82
CCNT1O60563 GAPDHP27-201ENST00000447427 1020 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AC115115.1-201ENST00000449927 248 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 SNRPGP6-201ENST00000451124 220 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.67□□□□□ -1.82
CCNT1O60563 snoU13.4-201ENST00000458916 104 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AC010631.1-201ENST00000474150 156 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.67□□□□□ -1.82
CCNT1O60563 RNU6-314P-201ENST00000516574 104 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 MTND1P5-201ENST00000517906 940 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.67□□□□□ -1.82
CCNT1O60563 AC090572.1-201ENST00000519251 160 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 FAM60DP-201ENST00000524174 632 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.67□□□□□ -1.82
CCNT1O60563 TPRKBP2-201ENST00000565969 475 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 MIR3944-201ENST00000581277 108 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AF038458.1-201ENST00000588406 262 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.67□□□□□ -1.82
CCNT1O60563 AL606834.2-201ENST00000602954 668 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AL391646.1-201ENST00000603860 190 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 AC012443.1-201ENST00000605605 231 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.67□□□□□ -1.82
CCNT1O60563 AC092954.2-201ENST00000609103 430 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 SEPT14P19-203ENST00000633205 211 ntBASIC3.67□□□□□ -1.82
CCNT1O60563 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCNT1O60563 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNT1O60563 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CCNT1O60563 SNORA31-201ENST00000362607 130 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 SNORD56.2-201ENST00000363242 71 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 RNU6-511P-201ENST00000363496 107 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCNT1O60563 CALM2P3-201ENST00000400429 449 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 RNA5SP44-201ENST00000410446 133 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 RNU2-62P-201ENST00000410868 191 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 RPL21P66-201ENST00000426566 466 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.66□□□□□ -1.82
CCNT1O60563 SETP5-201ENST00000437270 562 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC093156.1-201ENST00000440382 670 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AL662791.1-201ENST00000441992 928 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 MTCO3P45-201ENST00000443036 613 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AL121871.1-201ENST00000443413 436 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 MTATP6P30-201ENST00000443540 664 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.66□□□□□ -1.82
CCNT1O60563 AL136380.1-201ENST00000447970 162 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC132479.1-201ENST00000449160 144 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC006539.3-201ENST00000454258 129 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 RPL23AP31-201ENST00000456160 467 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AL049714.1-201ENST00000466686 347 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.66□□□□□ -1.82
CCNT1O60563 AC108860.1-201ENST00000484521 383 ntBASIC3.66□□□□□ -1.82
CCNT1O60563 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms