Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB2O43679 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 HMGB1P6-201ENST00000569046 646 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC090616.5-202ENST00000582111 297 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.47□□□□□ -1.85
LDB2O43679 AC012468.1-201ENST00000604888 430 ntBASIC3.47□□□□□ -1.85
LDB2O43679 HMGN2P28-201ENST00000606102 262 ntBASIC3.47□□□□□ -1.85
LDB2O43679 MIR7851-201ENST00000610611 160 ntBASIC3.47□□□□□ -1.85
LDB2O43679 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
LDB2O43679 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB2O43679 AC015967.1-201ENST00000619893 476 ntBASIC3.47□□□□□ -1.85
LDB2O43679 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 ZNF680P1-201ENST00000436625 1469 ntBASIC3.47□□□□□ -1.85
LDB2O43679 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
LDB2O43679 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LDB2O43679 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
LDB2O43679 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
LDB2O43679 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.46□□□□□ -1.85
LDB2O43679 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
LDB2O43679 DDX10P1-201ENST00000448545 1933 ntBASIC3.46□□□□□ -1.85
LDB2O43679 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 AC058791.1-201ENST00000608412 3198 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC032011.1-201ENST00000611703 1549 ntBASIC3.46□□□□□ -1.86
LDB2O43679 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LDB2O43679 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 RNU6-877P-201ENST00000383868 107 ntBASIC3.46□□□□□ -1.86
LDB2O43679 RNU6-74P-201ENST00000384235 107 ntBASIC3.46□□□□□ -1.86
LDB2O43679 RNU6-39P-201ENST00000384344 107 ntBASIC3.46□□□□□ -1.86
LDB2O43679 MIR558-201ENST00000384920 94 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC068050.1-201ENST00000394891 380 ntBASIC3.46□□□□□ -1.86
LDB2O43679 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB2O43679 MED13P1-201ENST00000428342 171 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC073063.1-201ENST00000434352 607 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 RPS15AP9-201ENST00000439856 381 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 AL121871.1-201ENST00000443413 436 ntBASIC3.46□□□□□ -1.86
LDB2O43679 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 RN7SL293P-201ENST00000481765 281 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC069439.1-201ENST00000494739 167 ntBASIC3.46□□□□□ -1.86
LDB2O43679 NIPA2P2-201ENST00000496376 1083 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB2O43679 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.46□□□□□ -1.86
LDB2O43679 RNU7-51P-201ENST00000516560 62 ntBASIC3.46□□□□□ -1.86
LDB2O43679 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 OR5B10P-201ENST00000532869 642 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC128657.1-201ENST00000549459 145 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AL121603.1-201ENST00000553815 142 ntBASIC3.46□□□□□ -1.86
LDB2O43679 TGIF1P1-201ENST00000558095 802 ntBASIC3.46□□□□□ -1.86
LDB2O43679 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 AC008752.3-201ENST00000588113 712 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB2O43679 DUXAP9-208ENST00000622815 614 ntBASIC3.46□□□□□ -1.86
LDB2O43679 AL136313.1-201ENST00000624804 202 ntBASIC3.46□□□□□ -1.86
LDB2O43679 FER-210ENST00000628534 558 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB2O43679 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 AC066616.2-201ENST00000559334 1481 ntBASIC3.46□□□□□ -1.86
LDB2O43679 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB2O43679 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB2O43679 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LDB2O43679 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LDB2O43679 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB2O43679 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB2O43679 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDB2O43679 HSPA8P1-201ENST00000425843 1833 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AL513302.2-201ENST00000562313 1842 ntBASIC3.45□□□□□ -1.86
LDB2O43679 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
LDB2O43679 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDB2O43679 MIR30E-201ENST00000362104 92 ntBASIC3.45□□□□□ -1.86
LDB2O43679 Y_RNA.22-201ENST00000362492 102 ntBASIC3.45□□□□□ -1.86
LDB2O43679 Y_RNA.303-201ENST00000364998 94 ntBASIC3.45□□□□□ -1.86
LDB2O43679 SNORD17-201ENST00000390930 237 ntBASIC3.45□□□□□ -1.86
LDB2O43679 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDB2O43679 RNU6-908P-201ENST00000410160 94 ntBASIC3.45□□□□□ -1.86
LDB2O43679 RNU2-9P-201ENST00000410194 145 ntBASIC3.45□□□□□ -1.86
LDB2O43679 RNU2-43P-201ENST00000410306 190 ntBASIC3.45□□□□□ -1.86
LDB2O43679 RN7SKP111-201ENST00000410349 271 ntBASIC3.45□□□□□ -1.86
LDB2O43679 RNU2-37P-201ENST00000410695 177 ntBASIC3.45□□□□□ -1.86
LDB2O43679 UBE2FP1-201ENST00000416536 447 ntBASIC3.45□□□□□ -1.86
LDB2O43679 ZNF90P2-204ENST00000419323 1075 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AL109913.1-201ENST00000421173 514 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms