Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC016065.2-201ENST00000514530 444 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RNU6-1073P-201ENST00000517182 106 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RN7SKP289-201ENST00000517244 295 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD6O43541 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD6O43541 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD6O43541 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD6O43541 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD6O43541 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD6O43541 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC055876.1-202ENST00000567053 138 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 MIR3167-201ENST00000579623 85 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 VN1R80P-201ENST00000597126 338 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD6O43541 BX664608.1-201ENST00000610519 487 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AC019176.2-201ENST00000611579 315 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AC015967.1-201ENST00000619893 476 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AC005858.4-201ENST00000623191 700 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD6O43541 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD6O43541 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD6O43541 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD6O43541 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC107081.3-201ENST00000612715 2034 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SMAD6O43541 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD6O43541 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD6O43541 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SMAD6O43541 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SMAD6O43541 SNORA69-201ENST00000383895 132 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 RNU6-1181P-201ENST00000384191 106 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 RNU6-441P-201ENST00000384545 106 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 MIR7-3-201ENST00000384898 110 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC016769.3-201ENST00000396562 315 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD6O43541 AL590004.1-201ENST00000405321 300 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 RNU6-1068P-201ENST00000410958 103 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 RN7SKP53-201ENST00000411337 315 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC005534.2-201ENST00000431047 433 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AL159987.2-201ENST00000432754 307 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD6O43541 USP9YP15-201ENST00000442391 422 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD6O43541 PRDX3P3-201ENST00000447765 522 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC140076.1-201ENST00000449897 361 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD6O43541 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC084357.1-201ENST00000473404 255 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC104563.1-201ENST00000476147 376 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 RPS3AP50-201ENST00000487064 803 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AP001025.2-201ENST00000490908 477 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC093278.1-201ENST00000494700 600 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD6O43541 AC010587.1-201ENST00000505809 469 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD6O43541 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD6O43541 RNU6-579P-201ENST00000516879 102 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD6O43541 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD6O43541 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD6O43541 AC243972.3-201ENST00000539655 198 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 MIR3118-1-201ENST00000581787 76 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD6O43541 AL391813.2-201ENST00000609113 322 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC012314.7-201ENST00000619693 93 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD6O43541 AL160413.1-201ENST00000622780 310 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 AC091953.2-201ENST00000623979 160 ntBASIC3.59□□□□□ -1.83
SMAD6O43541 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD6O43541 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD6O43541 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD6O43541 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.84
SMAD6O43541 MTCO1P12-201ENST00000414273 1543 ntBASIC3.59□□□□□ -1.84
SMAD6O43541 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMAD6O43541 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.59□□□□□ -1.84
SMAD6O43541 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMAD6O43541 AL645937.1-201ENST00000641739 1652 ntBASIC3.59□□□□□ -1.84
SMAD6O43541 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.84
SMAD6O43541 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMAD6O43541 AC092125.1-201ENST00000562568 1995 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
SMAD6O43541 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMAD6O43541 MIR208A-201ENST00000362287 71 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 SNORA63.1-201ENST00000362493 131 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 RNU4-35P-201ENST00000362588 141 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 Y_RNA.157-201ENST00000363638 102 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 RNU4-1-201ENST00000363925 141 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 Y_RNA.326-201ENST00000365176 113 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMAD6O43541 SNORA20.2-201ENST00000383922 131 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 Y_RNA.419-201ENST00000384041 102 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 SNORA51.6-201ENST00000384151 125 ntBASIC3.58□□□□□ -1.84
SMAD6O43541 MIR649-201ENST00000384843 97 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms