Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN3O15551 AC126182.1-201ENST00000478134 357 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN3O15551 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN3O15551 MTCYBP43-201ENST00000513621 740 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 AC114781.4-201ENST00000513707 639 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN3O15551 RN7SKP24-201ENST00000515888 284 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 RNA5SP216-201ENST00000516111 123 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN3O15551 ATP5F1P5-201ENST00000526403 760 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 UBTFL10-201ENST00000528532 562 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.77□□□□□ -1.97
CLDN3O15551 AC234778.2-201ENST00000566241 354 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 AC026790.2-201ENST00000606282 430 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN3O15551 BX664608.1-201ENST00000610519 487 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 U4.3-201ENST00000621047 82 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN3O15551 AC103798.2-201ENST00000624292 632 ntBASIC2.77□□□□□ -1.97
CLDN3O15551 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN3O15551 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLDN3O15551 CR848007.1-201ENST00000442354 1699 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN3O15551 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN3O15551 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN3O15551 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN3O15551 AC080125.1-201ENST00000414888 684 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN3O15551 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN3O15551 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN3O15551 MTCO1P27-201ENST00000448269 226 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 RPL12P25-201ENST00000455592 494 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 RPS15AP34-201ENST00000487776 387 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN3O15551 AC114786.4-201ENST00000508771 728 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN3O15551 AC114797.1-201ENST00000514003 728 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 RNA5SP320-201ENST00000516263 124 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN3O15551 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN3O15551 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN3O15551 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN3O15551 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN3O15551 AC123904.3-201ENST00000547218 814 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN3O15551 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.76□□□□□ -1.97
CLDN3O15551 AL158042.1-201ENST00000605338 460 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 AL161734.1-201ENST00000609720 557 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 AL391834.2-201ENST00000609982 546 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 AC008498.1-201ENST00000613012 531 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 AC079395.3-201ENST00000615161 484 ntBASIC2.76□□□□□ -1.97
CLDN3O15551 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN3O15551 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.76□□□□□ -1.97
CLDN3O15551 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN3O15551 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN3O15551 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN3O15551 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN3O15551 CCT4P2-201ENST00000233836 1548 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 RNU6-462P-201ENST00000362659 105 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 SNORA4.1-201ENST00000364263 144 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN3O15551 RNU6-925P-201ENST00000384629 104 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 MTND4P13-201ENST00000402078 1023 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN3O15551 BTF3L4P3-201ENST00000418879 476 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AL117351.1-201ENST00000438864 766 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN3O15551 MTCO3P45-201ENST00000443036 613 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 RPL26P9-201ENST00000457466 433 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 USP9YP25-201ENST00000457708 443 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC008481.1-201ENST00000463278 396 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 MRPS17P3-201ENST00000465453 385 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN3O15551 AIG1P1-201ENST00000503376 148 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN3O15551 CKS1BP7-201ENST00000522230 235 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.75□□□□□ -1.97
CLDN3O15551 SUB1P1-201ENST00000524415 382 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC023538.1-201ENST00000534576 736 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN3O15551 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN3O15551 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.75□□□□□ -1.97
CLDN3O15551 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 UBE2L4-201ENST00000587688 464 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC136601.2-201ENST00000604356 474 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC112220.3-201ENST00000605502 502 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 FTX_3.1-201ENST00000610451 147 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC097478.2-201ENST00000610572 514 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC022306.3-201ENST00000619930 550 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN3O15551 AL158801.5-201ENST00000623123 465 ntBASIC2.75□□□□□ -1.97
CLDN3O15551 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN3O15551 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLDN3O15551 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CLDN3O15551 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms