Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC084364.2-201ENST00000546924 395 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC087481.2-201ENST00000565492 330 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 SNORD114-21-201ENST00000606412 72 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 DUXAP10-204ENST00000612052 616 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 MTND5P9-201ENST00000503854 1755 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 MIR449A-201ENST00000362113 91 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 RNU4-38P-201ENST00000364472 129 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 RPS12P24-201ENST00000412619 387 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC241584.1-201ENST00000438469 1241 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 PNPLA4P1-201ENST00000458328 305 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC117522.2-201ENST00000510049 657 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC108157.1-201ENST00000510511 539 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 SNORA48.10-201ENST00000516965 160 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 OR5B19P-201ENST00000531766 928 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 MTND4LP24-201ENST00000572277 291 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC013244.2-201ENST00000603396 103 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC128687.1-201ENST00000605304 619 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC007620.3-201ENST00000608131 497 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 SCARNA15.3-201ENST00000626315 122 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 SCARNA4.1-201ENST00000628597 123 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC010329.5-201ENST00000623497 2174 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.67□□□□□ -2.3
LINC01549A6NIU2 TEX21P-201ENST00000447107 1476 ntBASIC0.67□□□□□ -2.3
LINC01549A6NIU2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 MIR493-201ENST00000385254 89 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AL021407.1-201ENST00000404531 386 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC009474.2-201ENST00000451383 136 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 RN7SKP210-201ENST00000459176 261 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC021382.1-201ENST00000483523 359 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 SCARNA11.3-201ENST00000517276 130 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 IMMP1LP2-201ENST00000552954 492 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AP001330.4-201ENST00000604350 154 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AL353770.2-201ENST00000620024 78 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 AC015726.3-201ENST00000624501 418 ntBASIC0.66□□□□□ -2.3
LINC01549A6NIU2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01549A6NIU2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 RNU4-74P-201ENST00000411280 161 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 HMGB1P48-201ENST00000446155 598 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 HMGN2P18-201ENST00000450680 270 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AC008526.1-201ENST00000509149 338 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AC091544.4-201ENST00000555268 342 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AC011260.1-201ENST00000578420 472 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AC055764.2-201ENST00000610089 670 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 AP006248.3-201ENST00000623580 594 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 ICE2P2-201ENST00000483823 2787 ntBASIC0.65□□□□□ -2.31
LINC01549A6NIU2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 SNORA7.1-201ENST00000363750 139 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 RNU6-532P-201ENST00000384318 107 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 RNA5SP212-201ENST00000391223 107 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 TOMM20P4-201ENST00000427861 435 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC132942.1-201ENST00000486753 483 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms