Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 USP9YP10-201ENST00000454868 628 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 SNRPFP4-201ENST00000456366 242 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 RPL23AP41-201ENST00000484754 458 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 RNU7-193P-201ENST00000516723 65 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 BNIP3P8-201ENST00000597863 560 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AC040168.1-201ENST00000623594 991 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 MIR7515-201ENST00000637837 67 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 AC131280.1-202ENST00000624067 4211 ntBASIC1.4□□□□□ -2.19
TRAV17A0A0B4J275 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC008568.2-201ENST00000623862 2313 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 RNU4-51P-201ENST00000364206 140 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-234P-201ENST00000365229 104 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 RNU2-17P-201ENST00000410290 190 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-174P-201ENST00000410406 106 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-1328P-201ENST00000410938 106 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC092573.2-201ENST00000434546 243 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 KLF3P2-201ENST00000465138 268 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 VPS26AP1-201ENST00000483197 979 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC006499.2-201ENST00000513470 337 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 SUMO2P14-201ENST00000604488 293 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AL627230.6-201ENST00000611129 280 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AL109659.3-201ENST00000624985 950 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AP003399.1-201ENST00000637534 361 ntBASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV17A0A0B4J275 AC130650.2-201ENST00000618736 2403 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 MTND5P31-201ENST00000419366 1374 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 MTND4P27-201ENST00000450813 1354 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC111188.2-201ENST00000529697 1387 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-543P-201ENST00000362576 108 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RNU4-23P-201ENST00000362839 140 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-173P-201ENST00000364215 104 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 MIR767-201ENST00000390228 109 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-220P-201ENST00000390919 107 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 TATDN1P1-201ENST00000414123 891 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 ATG12P2-201ENST00000456830 416 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-420P-201ENST00000458780 107 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 snoU109.4-201ENST00000458953 143 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 CABYRP1-201ENST00000465493 1045 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC105252.1-201ENST00000503089 286 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-928P-201ENST00000516876 104 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 SNORA31.23-201ENST00000517219 133 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AP005902.1-201ENST00000521358 186 ntBASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV17A0A0B4J275 Y_RNA.327-201ENST00000365201 102 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 MIR1287-201ENST00000408492 90 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 MRPS17P9-201ENST00000511924 393 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 Y_RNA.673-201ENST00000516306 88 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 RNU6-798P-201ENST00000516912 103 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 SNORA48.10-201ENST00000516965 160 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AC008676.3-201ENST00000521237 435 ntBASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV17A0A0B4J275 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms