Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC092436.1-201ENST00000506450 503 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC114786.4-201ENST00000508771 728 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC023141.11-201ENST00000508864 202 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 COL6A4P2-205ENST00000509855 506 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC114797.1-201ENST00000514003 728 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 RANP3-201ENST00000530970 276 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC008127.2-201ENST00000549925 1075 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MTCYBP27-201ENST00000555160 670 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC087465.1-201ENST00000560574 245 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MIR4419B-201ENST00000577260 68 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MIR4666A-201ENST00000580160 79 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AL161729.4-201ENST00000604650 476 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC080013.4-201ENST00000607624 649 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AL592148.2-201ENST00000612210 372 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MIR6715A-201ENST00000615929 79 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 MIR6130-201ENST00000619419 109 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC080188.3-201ENST00000624842 748 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 AC080128.1-201ENST00000474389 1917 ntBASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV3A0A0B4J244 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-839P-201ENST00000363347 108 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 RNA5SP88-201ENST00000365560 109 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 OR1L1-202ENST00000373686 1083 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 FABP5P13-201ENST00000452144 328 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 RPS29P20-201ENST00000489592 171 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 RPS29P21-201ENST00000496272 170 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC022447.1-201ENST00000515358 464 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 RNU6-885P-201ENST00000516607 104 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AP002748.2-201ENST00000528671 348 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AP000916.1-201ENST00000533869 835 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AP000873.5-201ENST00000533906 236 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 LARP7P2-201ENST00000575306 125 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 OR4K8P-201ENST00000578842 1048 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC068790.3-201ENST00000602988 553 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AL671309.1-201ENST00000603750 544 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC021749.1-201ENST00000604322 607 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 VN1R9P-201ENST00000614184 867 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AL162373.1-201ENST00000620433 407 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AL158801.5-201ENST00000623123 465 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 AP003400.5-201ENST00000624827 617 ntBASIC1.47□□□□□ -2.17
TRAV3A0A0B4J244 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 HMGB1P17-201ENST00000403495 628 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AL356131.1-201ENST00000405826 414 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 RPS7P9-201ENST00000414704 586 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC092634.6-201ENST00000418558 192 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 HMGB1P49-201ENST00000418882 569 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 SFR1P2-201ENST00000421841 730 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AL355994.1-201ENST00000424379 260 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AL451074.3-201ENST00000437709 472 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 Z82210.1-201ENST00000440037 231 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC016691.1-201ENST00000441321 413 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 USP9YP15-201ENST00000442391 422 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 MTATP6P7-201ENST00000453315 681 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AP1S2P1-201ENST00000457344 379 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 RPL30P9-201ENST00000465586 330 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC092757.1-201ENST00000467293 467 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 RPS29P11-201ENST00000496507 171 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC138853.1-201ENST00000503549 823 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AP005902.1-201ENST00000521358 186 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 OR5AQ1P-201ENST00000527596 927 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AL132857.1-201ENST00000555180 708 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 HSPE1P3-201ENST00000559254 309 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 MIR5571-201ENST00000577998 113 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 RPP40P2-201ENST00000603596 712 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AL355877.2-201ENST00000603670 358 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC107214.2-201ENST00000608204 634 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC106730.3-201ENST00000624568 641 ntBASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
TRAV3A0A0B4J244 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC009487.4-201ENST00000624969 3585 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 RNU5A-1-201ENST00000362698 116 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms