Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 ANP32BP3-201ENST00000559213 706 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC087465.1-201ENST00000560574 245 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 MIR4637-201ENST00000582405 84 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC080013.4-201ENST00000607624 649 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC078880.5-201ENST00000617845 421 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AL031601.2-202ENST00000622650 282 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC087821.2-201ENST00000637086 450 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 SNRPEP3-201ENST00000338402 276 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL355497.1-201ENST00000406262 551 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC107081.1-201ENST00000414975 361 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 DPRXP1-201ENST00000426312 460 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 SEPT7P5-201ENST00000434048 306 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 COX6CP12-201ENST00000446748 202 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 TMEM251P1-201ENST00000503717 318 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC022861.1-201ENST00000522981 663 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL391261.3-201ENST00000557194 520 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC023824.2-201ENST00000566185 400 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 MIR3616-201ENST00000584070 92 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 HMGN2P15-201ENST00000585707 270 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC009314.1-201ENST00000603871 304 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC068313.1-201ENST00000604028 1008 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL583856.2-201ENST00000606298 543 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL590099.1-201ENST00000615276 138 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 MIR6130-201ENST00000619419 109 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 MIR1322-201ENST00000638013 71 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 MKKS-204ENST00000639674 192 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.12□□□□□ -2.07
USH1CQ9Y6N9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL137003.2-201ENST00000606924 2538 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 RNU6-468P-201ENST00000384003 109 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 PPP1R11P2-201ENST00000423543 382 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC008850.1-201ENST00000427546 362 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL035407.1-201ENST00000429211 571 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 MYL8P-204ENST00000431574 518 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 BNIP3P2-201ENST00000441221 577 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AP1S2P1-201ENST00000457344 379 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 RN7SL636P-201ENST00000497504 294 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 RNU6-528P-201ENST00000516926 100 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AP001646.1-201ENST00000527936 915 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 HSPE1P3-201ENST00000559254 309 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC027176.1-201ENST00000560204 514 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL596245.1-201ENST00000618994 362 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 AC022336.2-201ENST00000568966 2538 ntBASIC2.11□□□□□ -2.07
USH1CQ9Y6N9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 HMGB1P17-201ENST00000403495 628 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AL450338.1-201ENST00000407987 512 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 AC092047.1-201ENST00000424997 240 ntBASIC2.1□□□□□ -2.07
USH1CQ9Y6N9 UBE2D3P3-201ENST00000426992 425 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms