Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 Z75741.1-201ENST00000446793 314 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 RN7SL807P-201ENST00000470923 297 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC126182.1-201ENST00000478134 357 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC110794.1-201ENST00000505816 425 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC004062.1-201ENST00000509926 645 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC124947.2-202ENST00000552735 133 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 SETP2-201ENST00000553886 926 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC087481.2-201ENST00000565492 330 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC060771.1-201ENST00000582031 164 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC073657.2-201ENST00000605661 303 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 SNORD39.4-201ENST00000620099 78 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC124864.2-201ENST00000624736 186 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC010149.2-201ENST00000637608 315 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 OR5H6-203ENST00000642105 978 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 AC058791.1-201ENST00000608412 3198 ntBASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SNX9Q9Y5X1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RNU5E-1-201ENST00000362477 120 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RNU6-114P-201ENST00000384704 105 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RNA5SP293-201ENST00000410527 113 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 PIGFP2-201ENST00000421400 651 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL358934.1-201ENST00000432346 324 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC003071.1-201ENST00000451219 789 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RBM43P1-201ENST00000476891 1081 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RNA5SP380-201ENST00000517190 98 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 OR4H12P-201ENST00000556269 907 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 RPL21P12-201ENST00000559810 515 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC136619.2-201ENST00000563361 631 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 MIR5680-201ENST00000577577 84 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC012669.1-201ENST00000603209 283 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC092954.2-201ENST00000609103 430 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC090517.2-201ENST00000614966 680 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AL138713.1-201ENST00000624026 2130 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 SEPT14P19-203ENST00000633205 211 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 AC073346.2-201ENST00000624724 2058 ntBASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX9Q9Y5X1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 MTND5P27-201ENST00000428871 1720 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC244517.1-201ENST00000606030 2086 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 RNU6-1103P-201ENST00000384150 107 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 MIR19A-201ENST00000384878 82 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 RPL23AP32-201ENST00000395315 459 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 RPL17P50-201ENST00000396131 546 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 GSTA9P-201ENST00000406231 611 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 SNORA11.1-201ENST00000408133 129 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 EIF1P1-201ENST00000421436 341 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AL359385.1-201ENST00000456509 365 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 RPS3AP17-201ENST00000472594 777 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC010265.1-201ENST00000513509 211 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 DEFB108A-201ENST00000530110 222 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms