Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC093270.2-201ENST00000486157 792 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RNU6-346P-201ENST00000516288 111 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC022559.1-201ENST00000520905 205 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC027288.2-201ENST00000553028 243 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC120057.2-201ENST00000571520 271 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 MIR4311-201ENST00000580794 100 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 MIR8080-201ENST00000622224 89 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC132068.1-201ENST00000623805 459 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC026951.1-201ENST00000559530 2459 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC006206.1-201ENST00000544842 3387 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.09□□□□□ -1.6
HRH3Q9Y5N1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
HRH3Q9Y5N1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HRH3Q9Y5N1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AC083843.3-201ENST00000623679 2186 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RNU6-740P-201ENST00000364734 105 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RNU6-356P-201ENST00000384140 107 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RNU6-21P-201ENST00000384710 107 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RPL11P3-201ENST00000395256 523 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RNU4-34P-201ENST00000410431 124 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RNU5A-5P-201ENST00000411054 116 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AL358453.1-201ENST00000422522 250 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AC021006.3-201ENST00000530771 192 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AL078605.1-201ENST00000603529 500 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AC005046.1-201ENST00000608515 625 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AL031595.2-201ENST00000624215 19071 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 AC233981.2-201ENST00000611524 1614 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 STX3-208ENST00000641815 3236 ntBASIC5.08□□□□□ -1.6
HRH3Q9Y5N1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 Y_RNA.8-201ENST00000362353 102 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 RNU6-428P-201ENST00000362942 107 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 Y_RNA.233-201ENST00000364407 101 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 RNU5E-7P-201ENST00000365290 117 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 RNU6-81P-201ENST00000365608 104 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 RNU6-843P-201ENST00000384454 104 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 Y_RNA.569-201ENST00000384749 103 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 MIR153-1-201ENST00000384914 90 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 RNA5SP296-201ENST00000410523 111 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 RPL23AP24-201ENST00000458203 385 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 HMGB1P14-201ENST00000557424 591 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AC012616.1-201ENST00000600294 197 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AP000769.2-201ENST00000602344 396 ntBASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HRH3Q9Y5N1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 OR4G2P-202ENST00000641004 1759 ntBASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 AC107027.3-201ENST00000565095 3473 ntBASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 Y_RNA.245-201ENST00000364493 95 ntBASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.06□□□□□ -1.6
HRH3Q9Y5N1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms