Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.150-201ENST00000363562 102 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 U3.6-201ENST00000363622 211 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 RN7SKP286-201ENST00000410894 299 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 MTCO3P29-201ENST00000432119 779 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 AL445305.1-201ENST00000432577 575 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 AC092647.2-201ENST00000452998 253 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL23AP24-201ENST00000458203 385 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 AC007458.1-201ENST00000542812 373 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 AC005476.1-201ENST00000554427 397 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL23AP78-201ENST00000599928 470 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 RN7SL787P-201ENST00000613000 284 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 AC006065.5-201ENST00000623427 349 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 U6.92-201ENST00000636464 89 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 HSPA8P1-201ENST00000425843 1833 ntBASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC022893.2-201ENST00000564832 3296 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AL356489.2-201ENST00000566968 3528 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC093535.2-201ENST00000624769 2326 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AL157777.2-201ENST00000258070 137 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.274-201ENST00000364714 101 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.277-201ENST00000364754 102 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 RN7SKP153-201ENST00000365026 316 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 RPS11P7-201ENST00000442125 465 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC124916.1-201ENST00000444020 547 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AL161636.2-201ENST00000445179 927 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 PTMAP3-201ENST00000447474 330 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 NDUFB4P10-201ENST00000452541 359 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 RNA5SP291-201ENST00000517222 105 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AP004371.1-201ENST00000525240 214 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC010186.2-204ENST00000537668 439 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AP002770.2-201ENST00000543613 532 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC022404.1-201ENST00000555320 273 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 RNA5SP440-201ENST00000612665 119 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR6861-201ENST00000618657 64 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 MAPK10-349ENST00000641767 3661 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 AL034549.2-201ENST00000618285 3373 ntBASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA11Q9Y5H2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AC083843.2-201ENST00000568248 6253 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 MUC2-202ENST00000613187 4845 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU6-1266P-201ENST00000362794 105 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.143-201ENST00000363520 106 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU5E-7P-201ENST00000365290 117 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 SNORA16A-201ENST00000384342 137 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 HSPA8P15-201ENST00000401676 786 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 RN7SKP293-201ENST00000411389 296 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 RPS29P14-201ENST00000431518 171 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 BX679664.1-201ENST00000434429 253 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL23AP22-201ENST00000437556 453 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 HIGD1AP2-201ENST00000446367 280 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 SNORA31.20-201ENST00000517111 133 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AP004607.2-201ENST00000533949 322 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms