Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DEFB109C-201ENST00000382575 264 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 DEFB109B-201ENST00000382656 264 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR23B-201ENST00000384832 97 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU6-550P-201ENST00000391057 101 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RNA5SP111-201ENST00000411386 101 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RPL30P16-201ENST00000419341 429 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AL121601.2-201ENST00000438019 707 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AL118520.1-201ENST00000450770 291 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 MTND3P16-201ENST00000452205 344 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RPS26P15-201ENST00000488067 348 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RNA5SP73-201ENST00000516744 108 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC107016.1-201ENST00000550463 337 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC006130.2-201ENST00000586202 326 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 BNIP3P9-201ENST00000603714 553 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC022893.3-201ENST00000607665 437 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC092794.2-201ENST00000620933 563 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC090740.1-201ENST00000623193 2262 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AL354685.2-201ENST00000448218 1447 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 AC018555.1-201ENST00000567548 1980 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 Y_RNA.231-201ENST00000364358 102 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU5E-4P-201ENST00000364931 120 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU6-741P-201ENST00000383889 107 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU2-37P-201ENST00000410695 177 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AL117339.2-201ENST00000430475 180 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 RPL23AP25-201ENST00000430973 463 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 NEK4P1-201ENST00000433383 879 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 ERLEC1P1-201ENST00000433806 578 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC098614.3-201ENST00000438957 440 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC009237.8-201ENST00000445492 379 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU7-180P-201ENST00000459240 63 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR2114-201ENST00000516645 80 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 Y_RNA.702-201ENST00000516843 96 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC012417.1-201ENST00000582307 1039 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR3941-201ENST00000582572 103 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC018638.8-201ENST00000588755 281 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC020914.4-201ENST00000597690 277 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC245389.1-201ENST00000605141 529 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR6867-201ENST00000610636 67 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 uc_338.34-201ENST00000617467 174 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 AC010338.1-201ENST00000621823 717 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 FAM35DP-201ENST00000323387 2712 ntBASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA3Q9Y5H0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR372-201ENST00000362225 67 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 Y_RNA.100-201ENST00000363141 102 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU6-288P-201ENST00000363690 104 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU6-82P-201ENST00000363970 107 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU4-66P-201ENST00000365199 138 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR301A-201ENST00000385261 86 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AL592114.1-201ENST00000403842 483 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 HSPE1P26-201ENST00000405341 275 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC108032.1-201ENST00000416706 207 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms