Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 RNU1-18P-201ENST00000363062 164 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AL357075.1-201ENST00000404107 726 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AC127391.1-201ENST00000411737 98 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 CCDC58P2-201ENST00000417131 366 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 ARF4P2-201ENST00000430209 526 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AC119618.1-201ENST00000434191 222 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 MTCO3P20-201ENST00000454926 688 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 RPL9P6-201ENST00000492764 598 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AF213884.2-201ENST00000510417 903 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AL592295.2-201ENST00000612578 206 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 AL133173.2-201ENST00000614270 90 ntBASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK11AQ9UQ88 CEP170P1-201ENST00000502249 4587 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 RPS4XP5-202ENST00000449995 1334 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 U3.26-201ENST00000391236 204 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 GSTA9P-201ENST00000406231 611 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 RNU2-43P-201ENST00000410306 190 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 RAC1P7-201ENST00000445367 377 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC234775.1-201ENST00000454247 670 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC084357.1-201ENST00000473404 255 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 RBM43P1-201ENST00000476891 1081 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 RPS3AP14-201ENST00000483907 780 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 Vault.3-201ENST00000516676 95 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 HMGN1P28-201ENST00000521340 364 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 MIR3146-201ENST00000580367 79 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 MIR3118-1-201ENST00000581787 76 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 KC877982.1-201ENST00000602313 470 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC004908.2-201ENST00000609090 574 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC091953.2-201ENST00000623979 160 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AL159972.1-201ENST00000625150 448 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC244205.2-202ENST00000635781 342 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC090740.1-201ENST00000623193 2262 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 AC006504.1-201ENST00000562493 3666 ntBASIC5.28□□□□□ -1.56
CDK11AQ9UQ88 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 Z98941.1-201ENST00000407764 100 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 RNU6-195P-201ENST00000411352 109 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 EIF1P1-201ENST00000421436 341 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 USP9YP36-201ENST00000424581 829 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 USP9YP15-201ENST00000442391 422 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC093392.2-201ENST00000450682 337 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 RNU7-170P-201ENST00000459303 61 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC020893.1-201ENST00000502452 580 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC108078.1-201ENST00000508073 725 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC004024.1-201ENST00000549244 247 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AL137843.1-201ENST00000605078 385 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AP000860.1-201ENST00000605250 559 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AL158209.2-201ENST00000619266 216 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC005858.4-201ENST00000623191 700 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC112204.3-201ENST00000623822 332 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AC068880.5-201ENST00000624331 290 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 AL160394.1-201ENST00000624765 724 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK11AQ9UQ88 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 MIR135A2-201ENST00000384854 100 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC137499.1-201ENST00000427602 88 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms