Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 OR4R1P-201ENST00000529879 463 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC125611.2-201ENST00000551907 647 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC055876.1-202ENST00000567053 138 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC006116.10-201ENST00000591836 581 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 SNRPGP15-201ENST00000600149 222 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC005858.4-201ENST00000623191 700 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC093648.1-201ENST00000623546 606 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AP003122.6-201ENST00000623831 495 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AL034408.1-202ENST00000636088 415 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 PRO1804-201ENST00000623780 2050 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC006020.1-201ENST00000420179 1854 ntBASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4AQ9UN37 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL139276.1-201ENST00000311910 1001 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 SNORA69-201ENST00000383895 132 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 SNORD3H-201ENST00000384486 214 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 MIR454-201ENST00000390180 115 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 RNU6-328P-201ENST00000390887 106 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 RN7SKP156-201ENST00000410308 342 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 RPL30P16-201ENST00000419341 429 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 MTATP6P4-201ENST00000427725 675 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 GTF2IP20-201ENST00000431663 360 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 MTATP6P16-201ENST00000434543 526 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC008481.1-201ENST00000463278 396 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC026403.1-201ENST00000518938 295 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 HMGB1P41-201ENST00000520234 440 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AP004371.1-201ENST00000525240 214 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AP001646.1-201ENST00000527936 915 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC091516.1-201ENST00000549191 703 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 MIR5047-201ENST00000579212 100 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC010591.1-201ENST00000603941 649 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC012443.1-201ENST00000605605 231 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL020991.1-201ENST00000612314 373 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 AL137003.2-201ENST00000606924 2538 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
VPS4AQ9UN37 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4AQ9UN37 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 NCAPGP1-201ENST00000505112 1814 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC073343.1-201ENST00000328239 651 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 RNU6-76P-201ENST00000384060 104 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC110754.1-201ENST00000399740 601 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 RNU2-9P-201ENST00000410194 145 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 TOMM22P1-201ENST00000418578 312 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 SDCBPP3-201ENST00000419629 891 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AL139413.1-201ENST00000421309 217 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC083863.1-201ENST00000438811 231 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 CACYBPP2-201ENST00000453625 678 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC010631.1-201ENST00000474150 156 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 PCBP2P3-201ENST00000509726 843 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC105417.1-201ENST00000514691 285 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms