Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 RNU2-15P-201ENST00000410692 191 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL356867.1-201ENST00000429623 299 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 UBE2V1P6-201ENST00000430840 422 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL512637.2-201ENST00000431287 1256 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC008427.1-201ENST00000503102 655 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 AC012640.5-201ENST00000623897 319 ntBASIC1.67□□□□□ -2.14
CCDC88CQ9P219 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 RNU6-198P-201ENST00000384258 104 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 U3.29-201ENST00000391296 212 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC092047.1-201ENST00000424997 240 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC005345.1-201ENST00000431868 217 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 RNFT1P2-201ENST00000443064 757 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC010468.3-201ENST00000508225 458 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 CASP1P1-201ENST00000526345 212 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 COX6CP5-201ENST00000527162 228 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 MIR3616-201ENST00000584070 92 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AL354696.1-201ENST00000614652 497 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC073968.1-201ENST00000618594 637 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AL031601.2-202ENST00000622650 282 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 MIR16-2-201ENST00000362117 81 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 RNU6-932P-201ENST00000391108 106 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 SNORD23.1-201ENST00000408212 104 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 DPPA3P1-201ENST00000448050 469 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 ARL2BPP5-201ENST00000523141 481 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 AC105224.1-201ENST00000587055 421 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.66□□□□□ -2.14
CCDC88CQ9P219 ZNF663P-202ENST00000641770 1131 ntBASIC1.66□□□□□ -2.14
CCDC88CQ9P219 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 BX664727.1-201ENST00000416024 466 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC246680.2-201ENST00000422106 389 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 RPL7L1P10-201ENST00000427790 463 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 RPL17P35-201ENST00000432217 549 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 RPL7P55-201ENST00000450522 746 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 PPP1R2P5-201ENST00000457256 603 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC090096.1-201ENST00000489168 390 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC008628.1-201ENST00000508663 265 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC025768.1-201ENST00000510057 267 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 RNU6-416P-201ENST00000516265 103 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 HSPE1P18-201ENST00000517602 280 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC026616.1-201ENST00000523157 525 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 U73023.1-201ENST00000603134 700 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AL035411.2-201ENST00000604022 421 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC012443.1-201ENST00000605605 231 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC88CQ9P219 OR1S1-201ENST00000624470 978 ntBASIC1.65□□□□□ -2.15
CCDC88CQ9P219 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CCDC88CQ9P219 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC88CQ9P219 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC88CQ9P219 AL355615.1-201ENST00000406187 641 ntBASIC1.64□□□□□ -2.15
CCDC88CQ9P219 UBE2V1P15-201ENST00000407776 448 ntBASIC1.64□□□□□ -2.15
CCDC88CQ9P219 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.64□□□□□ -2.15
CCDC88CQ9P219 HMGN2P19-201ENST00000425149 265 ntBASIC1.64□□□□□ -2.15
CCDC88CQ9P219 USP9YP15-201ENST00000442391 422 ntBASIC1.64□□□□□ -2.15
CCDC88CQ9P219 AL096803.2-201ENST00000450032 677 ntBASIC1.64□□□□□ -2.15
CCDC88CQ9P219 CDC42P1-201ENST00000456658 548 ntBASIC1.64□□□□□ -2.15
CCDC88CQ9P219 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC88CQ9P219 AC087588.1-201ENST00000462203 316 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms