Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RPL23AP2-201ENST00000471227 466 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RN7SL41P-201ENST00000476144 297 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RN7SL810P-201ENST00000493031 276 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MIR3941-201ENST00000582572 103 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MIR4697-201ENST00000582977 78 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL021997.2-201ENST00000615674 271 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 uc_338.13-201ENST00000618243 179 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL023881.1-201ENST00000621088 301 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC008013.2-202ENST00000637965 364 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP509-201ENST00000364577 119 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP513-201ENST00000364648 118 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 SNORD116-11-201ENST00000383882 92 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 SNORA36C-201ENST00000384289 132 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RNU6-817P-201ENST00000391083 104 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC097374.1-203ENST00000400783 485 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RPL21P109-201ENST00000422213 475 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RPS29P17-201ENST00000430795 166 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 HMGB1P27-201ENST00000431429 603 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL591704.1-201ENST00000432574 275 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC091390.1-201ENST00000433904 331 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 FABP5P14-201ENST00000437273 393 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 MRPS31P2-201ENST00000451581 518 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.631-201ENST00000459607 101 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RPL35AP15-201ENST00000468042 339 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 SNORA14.1-201ENST00000516113 141 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AP004371.1-201ENST00000525240 214 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL163153.1-201ENST00000554223 283 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 MIR5692C1-201ENST00000585309 91 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 BDH2P1-201ENST00000602288 736 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC113403.1-201ENST00000604910 193 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL080274.1-201ENST00000605565 220 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL162730.1-201ENST00000605734 292 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC040896.1-201ENST00000613819 479 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 FAM157A-202ENST00000615155 405 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC011944.2-201ENST00000624440 683 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL136964.1-201ENST00000622038 2990 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AC016588.2-201ENST00000632484 3021 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 AL365440.1-201ENST00000436135 2167 ntBASIC4.12□□□□□ -1.75
KCMF1Q9P0J7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 ZNF519P1-201ENST00000449011 1626 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 RPL5P18-201ENST00000406671 891 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 MIR1911-201ENST00000410783 80 ntBASIC4.11□□□□□ -1.75
KCMF1Q9P0J7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms