Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 BNIP3P6-201ENST00000549284 499 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 AL355836.1-201ENST00000555951 870 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 MIR4703-201ENST00000577728 79 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 AC024619.4-201ENST00000580924 316 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 AC004696.1-201ENST00000614345 607 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 MIR4727-201ENST00000622232 55 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 AC024614.3-201ENST00000637860 256 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 API5P2-201ENST00000397055 1498 ntBASIC4.35□□□□□ -1.71
VTA1Q9NP79 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VTA1Q9NP79 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VTA1Q9NP79 PRO1804-201ENST00000623780 2050 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VTA1Q9NP79 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VTA1Q9NP79 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VTA1Q9NP79 RPL7P26-201ENST00000333817 754 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 SNORA31-201ENST00000362607 130 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 Y_RNA.303-201ENST00000364998 94 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 RNU6-61P-201ENST00000365528 109 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 RNU6-946P-201ENST00000383878 107 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 SNORA24.1-201ENST00000384401 135 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL035423.1-201ENST00000420331 213 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL356867.1-201ENST00000429623 299 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 PRSS3P4-201ENST00000453323 162 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 RPL7P49-201ENST00000471402 708 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC092451.1-201ENST00000480211 153 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC108860.1-201ENST00000484521 383 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC004062.1-201ENST00000509926 645 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 PPBPP1-201ENST00000510807 373 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL359273.1-201ENST00000510918 627 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 NRON-201ENST00000517270 370 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 SNRPGP16-201ENST00000533275 226 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL138976.2-201ENST00000563989 694 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 BNIP3P30-201ENST00000601184 574 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AC012314.7-201ENST00000619693 93 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL773545.4-201ENST00000637262 310 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 AL513478.4-201ENST00000641636 310 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.34□□□□□ -1.71
VTA1Q9NP79 RIOK3P1-201ENST00000418778 1528 ntBASIC4.34□□□□□ -1.71
VTA1Q9NP79 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.34□□□□□ -1.72
VTA1Q9NP79 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.34□□□□□ -1.72
VTA1Q9NP79 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VTA1Q9NP79 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.34□□□□□ -1.72
VTA1Q9NP79 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VTA1Q9NP79 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.34□□□□□ -1.72
VTA1Q9NP79 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 PNPT1P2-201ENST00000456768 2050 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VTA1Q9NP79 NACAP2-201ENST00000318548 624 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 RNU6-188P-201ENST00000364207 107 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 SNORD115-7-201ENST00000365306 82 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 Y_RNA.381-201ENST00000365666 102 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 RNU6-1029P-201ENST00000384109 107 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 SOD2P1-201ENST00000396543 562 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AL356776.1-201ENST00000406574 447 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 RNU4-46P-201ENST00000410818 138 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC068533.1-201ENST00000418542 415 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 RPL30P16-201ENST00000419341 429 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC018630.2-202ENST00000422992 927 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 SRIP2-201ENST00000428470 166 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 HMGN2P31-201ENST00000432430 273 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 HLA-N-201ENST00000437516 135 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 NEFMP1-201ENST00000443423 1006 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 NDUFS5P3-201ENST00000450668 321 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC018710.1-201ENST00000506509 158 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC108078.2-201ENST00000510750 236 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.33□□□□□ -1.72
VTA1Q9NP79 AC025465.4-201ENST00000513422 638 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms