Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC006946.1-201ENST00000429106 328 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC011753.3-201ENST00000443436 406 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 RPS3AP12-201ENST00000443616 753 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 OR2AQ1P-201ENST00000451972 200 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 RN7SL319P-201ENST00000480656 221 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC015795.1-201ENST00000513669 327 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC069113.1-201ENST00000517763 267 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 HSPE1P20-201ENST00000538133 289 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC006600.1-201ENST00000572529 153 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 CPDP1-201ENST00000579660 283 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 MIR5692A1-201ENST00000580523 69 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC096772.1-201ENST00000609146 564 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 MIR6780B-201ENST00000610307 79 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AL138825.1-201ENST00000618587 192 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AL353748.2-201ENST00000622148 471 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSU72Q9NP77 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSU72Q9NP77 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSU72Q9NP77 AL451142.2-201ENST00000429076 2090 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 NEAT1-202ENST00000501122 22743 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNU6-770P-201ENST00000363929 105 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNU6-76P-201ENST00000384060 104 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 SNORA11.5-201ENST00000408163 128 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNA5SP296-201ENST00000410523 111 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNU6-325P-201ENST00000411132 105 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC114755.2-201ENST00000413520 361 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AL353621.1-201ENST00000418219 243 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 RPL12P46-201ENST00000436610 195 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 DAP3P1-201ENST00000441522 278 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 TPT1P13-201ENST00000449760 499 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 MTCO3P8-201ENST00000453691 755 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 MTND4LP30-201ENST00000454092 297 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 PPBPP1-201ENST00000510807 373 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 SNORD116-26-201ENST00000516006 96 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNU1-86P-201ENST00000516108 154 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 RNU1-107P-201ENST00000516617 154 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC022790.1-201ENST00000522872 204 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSU72Q9NP77 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 TRAV32-201ENST00000553993 340 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 OR1M4P-201ENST00000589199 287 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC068790.4-201ENST00000602474 263 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AL512329.2-201ENST00000607350 548 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC139769.1-204ENST00000472297 1931 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 AC005183.1-201ENST00000603687 1979 ntBASIC4.67□□□□□ -1.66
SSU72Q9NP77 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SSU72Q9NP77 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSU72Q9NP77 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL136164.3-201ENST00000624429 3978 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 RNU6-1093P-201ENST00000391194 107 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL109941.1-201ENST00000401925 229 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 RN7SKP167-201ENST00000411047 285 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC063979.1-201ENST00000415539 377 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL138899.2-201ENST00000439139 499 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL163193.1-201ENST00000444895 788 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 EIF4A1P11-201ENST00000451239 222 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC133473.1-201ENST00000455173 299 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms