Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC092754.2-201ENST00000463506 460 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 ZNF192P1-203ENST00000565888 810 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC090740.1-201ENST00000623193 2262 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AL359851.1-201ENST00000569460 4997 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 RNU1-101P-201ENST00000391171 127 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC022022.1-201ENST00000430304 178 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 SNRPGP13-201ENST00000442212 177 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 RPS15AP34-201ENST00000487776 387 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC023424.2-201ENST00000493479 777 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 MIR4653-201ENST00000585107 83 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 SNHG22-203ENST00000617833 660 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 CFTRP2-201ENST00000634304 199 ntBASIC1.05□□□□□ -2.24
CHD8Q9HCK8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 NACAP2-201ENST00000318548 624 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 RNU11-5P-201ENST00000391216 129 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 RPL7P31-201ENST00000450192 724 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 RNA5SP233-201ENST00000459153 113 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC096751.1-202ENST00000502691 1067 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 RNU6-758P-201ENST00000516292 89 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 ZNF33CP-201ENST00000432492 2030 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 HMGN2P35-201ENST00000412164 270 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 ARPC3P2-201ENST00000457786 533 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC006483.1-201ENST00000487308 313 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC096571.1-202ENST00000506634 735 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC104806.1-201ENST00000508720 308 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AL512605.2-201ENST00000592972 256 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC010889.1-201ENST00000566193 2666 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC073544.1-201ENST00000600110 1595 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHD8Q9HCK8 AC138915.1-201ENST00000565427 1685 ntBASIC1.04□□□□□ -2.24
CHD8Q9HCK8 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 HSPE1P1-201ENST00000421494 318 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 MTND6P13-201ENST00000443510 523 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AL109741.2-201ENST00000455561 343 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC021755.4-201ENST00000616620 456 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC067863.3-201ENST00000624172 122 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 HMGB1P13-201ENST00000406019 642 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 MIR1207-201ENST00000408249 87 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC012170.1-201ENST00000495139 359 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC093852.1-201ENST00000503587 266 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC121161.1-201ENST00000510606 652 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 RNA5SP67-201ENST00000516422 131 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 MIR4802-201ENST00000581881 80 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AL078605.1-201ENST00000603529 500 ntBASIC1.03□□□□□ -2.24
CHD8Q9HCK8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CHD8Q9HCK8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
CHD8Q9HCK8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 PGBD4P3-201ENST00000440731 581 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 RNA5SP310-201ENST00000459084 116 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 RPL30P4-201ENST00000429309 333 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 AC009901.1-201ENST00000506703 541 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 SNORA31.16-201ENST00000516773 139 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 AC009318.3-201ENST00000616916 503 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.02□□□□□ -2.25
CHD8Q9HCK8 uc_338.22-201ENST00000622722 187 ntBASIC1.02□□□□□ -2.25
CHD8Q9HCK8 DUXAP9-208ENST00000622815 614 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms