Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.23□□□□□ -1.57
ZFYVE28Q9HCC9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 RNU1-115P-201ENST00000365329 160 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 Y_RNA.480-201ENST00000384364 102 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 Y_RNA.496-201ENST00000384444 101 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 RNU6-306P-201ENST00000384617 107 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 RNU6-837P-201ENST00000391056 108 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 SNORA11.1-201ENST00000408133 129 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 CTSL3P-202ENST00000412179 788 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 SSXP9-201ENST00000417503 292 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 USP9YP30-201ENST00000430729 455 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AL645568.3-201ENST00000433683 316 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AL591212.2-201ENST00000433923 257 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 RPL23AP50-201ENST00000434149 455 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 RPL29P29-201ENST00000448725 423 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC084198.1-201ENST00000477747 402 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC116655.1-201ENST00000508324 901 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC126177.3-201ENST00000551839 688 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC024220.1-201ENST00000603675 484 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC113403.1-201ENST00000604910 193 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 MIR8059-201ENST00000620427 81 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 ASNSP1-201ENST00000518311 1939 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC005592.1-201ENST00000566527 1640 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AL158163.1-201ENST00000603915 1649 ntBASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
ZFYVE28Q9HCC9 AC139769.1-204ENST00000472297 1931 ntBASIC5.21□□□□□ -1.57
ZFYVE28Q9HCC9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 HSPE1P8-201ENST00000406997 288 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 RPL7AP73-201ENST00000413490 353 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 UBE2V1P4-201ENST00000425374 344 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AC097713.2-201ENST00000430199 356 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AL117339.2-201ENST00000430475 180 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 HMGB1P27-201ENST00000431429 603 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AC092451.1-201ENST00000480211 153 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 HMGB1P30-201ENST00000492455 606 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 SCARNA16.2-201ENST00000516520 172 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-635P-201ENST00000516651 102 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.721-201ENST00000517207 102 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AL161713.1-201ENST00000555538 145 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 MIR5692A1-201ENST00000580523 69 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 MIR4286-201ENST00000580651 93 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AC011494.1-201ENST00000596454 237 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 uc_338.13-201ENST00000618243 179 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AC112200.1-201ENST00000625015 234 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 AC004817.4-201ENST00000602396 3625 ntBASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ZFYVE28Q9HCC9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.389-201ENST00000383924 113 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.476-201ENST00000384347 108 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.574-201ENST00000384766 95 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 PTMAP2-201ENST00000397627 327 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 AP000580.1-201ENST00000404439 358 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 BX842559.1-201ENST00000419615 532 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 RPL7P2-201ENST00000427639 268 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 ISCUP1-201ENST00000454451 448 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 AC092436.3-201ENST00000511788 257 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-1271P-201ENST00000517049 105 ntBASIC5.2□□□□□ -1.58
ZFYVE28Q9HCC9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms