Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL590240.1-201ENST00000334118 313 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 RNU6-254P-201ENST00000363377 107 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 U3.42-201ENST00000408746 214 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 BX510359.2-201ENST00000417920 305 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL645608.4-201ENST00000423619 154 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 GPM6BP2-201ENST00000432046 144 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 GPM6BP1-201ENST00000446387 144 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 SNRPGP5-201ENST00000456003 220 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 RPL21P104-201ENST00000464143 478 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 RPL7P43-201ENST00000478876 753 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC006499.6-201ENST00000511169 607 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 RNU1-6P-201ENST00000516290 144 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 RNU6-273P-201ENST00000516937 96 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AP003122.3-201ENST00000526316 255 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC084851.1-201ENST00000529105 249 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL157871.3-201ENST00000557231 293 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 TRAV28-201ENST00000557548 323 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL355375.2-201ENST00000574825 175 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 MIR3941-201ENST00000582572 103 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC020910.2-201ENST00000603635 610 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 AC007785.2-201ENST00000598627 1916 ntBASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM55Q9BYV6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 RNU6-1303P-201ENST00000364841 107 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 Y_RNA.474-201ENST00000384341 102 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AL139095.3-201ENST00000419672 1203 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC073063.1-201ENST00000434352 607 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 NDUFB4P6-201ENST00000436819 366 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC133473.1-201ENST00000455173 299 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 RNU6-256P-201ENST00000516747 97 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 RNU6-1088P-201ENST00000516850 104 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC009643.1-201ENST00000532030 391 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 MIR1273C-201ENST00000578669 77 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 RN7SL690P-201ENST00000582087 240 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AL356055.1-201ENST00000602528 446 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC128687.2-201ENST00000609657 566 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 uc_338.15-201ENST00000615470 191 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 AL713922.2-201ENST00000619384 716 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM55Q9BYV6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC006026.1-201ENST00000444025 1803 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 RNU4-79P-201ENST00000362764 141 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 SNORA70.2-201ENST00000364506 135 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 MIR93-201ENST00000385024 80 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms