Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RPS15AP12-201ENST00000419498 388 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX2Q99626 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX2Q99626 AC092427.1-202ENST00000430569 476 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 GTF2IP3-201ENST00000433887 494 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC098826.1-201ENST00000433943 471 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 CR769767.1-201ENST00000436337 346 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 USP9YP22-201ENST00000438971 294 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 MTCYBP34-201ENST00000439552 670 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AL353691.1-201ENST00000451332 387 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AL031183.1-201ENST00000457667 207 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 RNA5SP310-201ENST00000459084 116 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 LINC00888-204ENST00000487386 421 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX2Q99626 SUMO2P5-201ENST00000506790 245 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC006390.1-201ENST00000508068 283 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.34□□□□□ -2.03
CDX2Q99626 RNU6-1225P-201ENST00000516336 65 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX2Q99626 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.34□□□□□ -2.03
CDX2Q99626 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.34□□□□□ -2.03
CDX2Q99626 MTCO3P13-201ENST00000577757 781 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 MIR4637-201ENST00000582405 84 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX2Q99626 AL022067.1-201ENST00000602426 454 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC012443.1-201ENST00000605605 231 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX2Q99626 RNU6-1192P-201ENST00000612197 107 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC005332.6-201ENST00000613178 446 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC025588.4-201ENST00000615802 908 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 MIR6076-201ENST00000617521 113 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 RNU6-489P-201ENST00000618289 107 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AL121895.2-201ENST00000619558 447 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC123767.1-202ENST00000620407 817 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 AC004009.2-201ENST00000623016 728 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 MIR6733-201ENST00000635723 61 ntBASIC2.34□□□□□ -2.03
CDX2Q99626 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CDX2Q99626 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDX2Q99626 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CDX2Q99626 AC097714.1-201ENST00000511272 1647 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 RNU6-882P-201ENST00000391025 103 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 HMGB1P17-201ENST00000403495 628 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC019129.1-201ENST00000403786 261 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX2Q99626 AL161449.1-201ENST00000414531 1199 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX2Q99626 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX2Q99626 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX2Q99626 HSFY7P-201ENST00000432672 318 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 RPL23AP74-201ENST00000437246 471 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 HSFY8P-201ENST00000437934 318 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.33□□□□□ -2.04
CDX2Q99626 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX2Q99626 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX2Q99626 HSFY5P-201ENST00000453726 309 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC234775.1-201ENST00000454247 670 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AL359385.1-201ENST00000456509 365 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC092798.1-201ENST00000458542 409 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC103975.1-201ENST00000482506 483 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX2Q99626 AC090453.1-201ENST00000495560 436 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX2Q99626 XKRY-201ENST00000510392 1100 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC010625.1-201ENST00000511296 403 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.33□□□□□ -2.04
CDX2Q99626 RNA5SP480-201ENST00000516840 109 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX2Q99626 AC118942.1-201ENST00000529674 1035 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC123904.3-201ENST00000547218 814 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AL355836.1-201ENST00000555951 870 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.33□□□□□ -2.04
CDX2Q99626 RPL23AP78-201ENST00000599928 470 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AL035411.2-201ENST00000604022 421 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC105148.1-201ENST00000604961 409 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AL158163.2-201ENST00000619110 700 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 AC009269.6-201ENST00000621778 588 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDX2Q99626 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.33□□□□□ -2.04
CDX2Q99626 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.33□□□□□ -2.04
CDX2Q99626 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CDX2Q99626 AC107982.1-201ENST00000507171 1300 ntBASIC2.33□□□□□ -2.04
CDX2Q99626 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDX2Q99626 AC099654.7-201ENST00000635788 2127 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AL161431.1-201ENST00000618966 4205 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDX2Q99626 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDX2Q99626 RNA5SP139-201ENST00000364340 117 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.32□□□□□ -2.04
CDX2Q99626 SNORD21-201ENST00000383953 95 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 MIR135A2-201ENST00000384854 100 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 DHFRP6-201ENST00000401776 268 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AL356057.2-201ENST00000403318 432 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AL591416.1-201ENST00000404015 867 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 RNU2-2P-201ENST00000410396 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AP1B1P2-201ENST00000416196 106 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AL096701.2-201ENST00000416920 238 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 Z75741.2-201ENST00000417272 1167 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms