Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 RNU6-40P-201ENST00000384254 107 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.1□□□□□ -2.07
SCAF11Q99590 AL136380.1-201ENST00000447970 162 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.1□□□□□ -2.07
SCAF11Q99590 RPS29P1-201ENST00000465274 159 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 RPL23AP41-201ENST00000484754 458 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 AC006390.1-201ENST00000508068 283 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.1□□□□□ -2.07
SCAF11Q99590 AF131216.2-201ENST00000512316 564 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCAF11Q99590 RNA5SP468-201ENST00000516782 93 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.1□□□□□ -2.07
SCAF11Q99590 AC010928.2-201ENST00000588017 287 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.1□□□□□ -2.07
SCAF11Q99590 MIR6788-201ENST00000618842 66 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 AC006963.1-201ENST00000624003 1052 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.1□□□□□ -2.07
SCAF11Q99590 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.1□□□□□ -2.07
SCAF11Q99590 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCAF11Q99590 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SCAF11Q99590 AL354685.2-201ENST00000448218 1447 ntBASIC2.1□□□□□ -2.07
SCAF11Q99590 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.09□□□□□ -2.07
SCAF11Q99590 CD24P4-201ENST00000382840 243 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 MT-TC-201ENST00000387405 66 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 RNU6-837P-201ENST00000391056 108 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 SFR1P1-201ENST00000403720 688 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 RNU4-65P-201ENST00000410473 140 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 RNU4-78P-201ENST00000410940 126 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC092745.2-202ENST00000411880 369 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAF11Q99590 OFD1P18Y-201ENST00000420889 959 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.09□□□□□ -2.07
SCAF11Q99590 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 snoU13.3-201ENST00000459441 104 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC010285.1-201ENST00000470580 392 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC010301.1-201ENST00000473936 355 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC087879.1-201ENST00000474343 374 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 RNF138P1-201ENST00000502765 546 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.09□□□□□ -2.07
SCAF11Q99590 AC027104.1-201ENST00000563702 681 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AL138976.2-201ENST00000563989 694 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAF11Q99590 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAF11Q99590 AC009220.3-201ENST00000604318 586 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AL390240.1-201ENST00000612950 384 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC018926.3-201ENST00000618841 406 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AL031601.2-202ENST00000622650 282 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 AC024595.1-201ENST00000623088 387 ntBASIC2.09□□□□□ -2.07
SCAF11Q99590 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAF11Q99590 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAF11Q99590 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SCAF11Q99590 AC073055.1-201ENST00000456901 1621 ntBASIC2.09□□□□□ -2.08
SCAF11Q99590 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
SCAF11Q99590 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SCAF11Q99590 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SCAF11Q99590 CDC27P3-201ENST00000635418 1910 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 RNU4-41P-201ENST00000364426 143 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 MIR520E-201ENST00000384867 87 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 Z85995.1-201ENST00000415547 335 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 RPS26P56-201ENST00000444468 240 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 MRPL42P6-201ENST00000486397 371 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 AC004062.1-201ENST00000509926 645 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.08□□□□□ -2.08
SCAF11Q99590 CIR1P1-201ENST00000524055 1133 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 AP005435.4-201ENST00000529514 284 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.08□□□□□ -2.08
SCAF11Q99590 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.08□□□□□ -2.08
SCAF11Q99590 SNORD84-203ENST00000584275 78 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SCAF11Q99590 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.08□□□□□ -2.08
SCAF11Q99590 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SCAF11Q99590 AC025016.1-201ENST00000616746 682 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 AP003122.6-201ENST00000623831 495 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCAF11Q99590 AC017104.5-201ENST00000637647 639 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 ZNF734P-201ENST00000419494 1534 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.08□□□□□ -2.08
SCAF11Q99590 AC007342.9-201ENST00000623877 1385 ntBASIC2.08□□□□□ -2.08
SCAF11Q99590 HMGB1P5-201ENST00000255320 642 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 RNU6-543P-201ENST00000362576 108 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 RNU6-263P-201ENST00000363811 107 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 MIR320A-201ENST00000385302 82 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 TAF9BP2-201ENST00000400856 499 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SCAF11Q99590 AL591034.1-201ENST00000407447 340 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 RNU6-272P-201ENST00000411028 104 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 AC092447.6-201ENST00000414578 210 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 RPS6P15-201ENST00000431996 751 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.07□□□□□ -2.08
SCAF11Q99590 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.07□□□□□ -2.08
SCAF11Q99590 AC009901.1-201ENST00000506703 541 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 SNORA31.20-201ENST00000517111 133 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 AC083923.1-201ENST00000523708 376 ntBASIC2.07□□□□□ -2.08
SCAF11Q99590 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.07□□□□□ -2.08
SCAF11Q99590 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.07□□□□□ -2.08
SCAF11Q99590 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.07□□□□□ -2.08
SCAF11Q99590 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms