Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 C1DP4-201ENST00000455429 424 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC022364.2-201ENST00000457963 554 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC023194.1-201ENST00000493084 308 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC026427.2-201ENST00000506228 536 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 MTND4LP22-201ENST00000508209 276 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 SCARNA24.1-201ENST00000516465 137 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC090572.1-201ENST00000519251 160 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC119501.1-201ENST00000603646 475 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AL136295.6-201ENST00000610486 658 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AL365204.3-201ENST00000612448 685 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 Z99129.1-201ENST00000612510 255 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC068831.8-201ENST00000620171 435 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 AC073308.1-201ENST00000623696 305 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.36□□□□□ -1.87
NR1H4Q96RI1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NR1H4Q96RI1 MTND5P29-201ENST00000458676 1807 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RNU6-108P-201ENST00000365558 107 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RNU6-190P-201ENST00000384154 102 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RNU6-456P-201ENST00000384493 107 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AC092047.1-201ENST00000424997 240 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 USP9YP14-201ENST00000430663 563 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RPS20P5-201ENST00000434808 360 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 Z74696.2-201ENST00000436514 498 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 BNIP3P2-201ENST00000441221 577 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 FABP5P13-201ENST00000452144 328 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AL135752.1-201ENST00000479477 471 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 RNA5SP164-201ENST00000516533 110 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AGGF1P4-201ENST00000568249 801 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 MIR5096-201ENST00000583713 70 ntBASIC3.35□□□□□ -1.87
NR1H4Q96RI1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.35□□□□□ -1.87
NR1H4Q96RI1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 OR5J1P-201ENST00000313544 939 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RNU6-181P-201ENST00000363225 107 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RNU6-288P-201ENST00000363690 104 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RNU6-140P-201ENST00000384566 108 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RN7SKP33-201ENST00000410942 340 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 DLGAP5P1-201ENST00000430307 464 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC093899.1-201ENST00000457984 376 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC092798.1-201ENST00000458542 409 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC091435.1-201ENST00000505442 584 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 RNU6-445P-201ENST00000516949 107 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AP003072.2-201ENST00000527756 676 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AMZ2P1-203ENST00000565833 850 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 MIR4700-201ENST00000578311 74 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC023575.1-201ENST00000580510 358 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 MIR6820-201ENST00000611508 62 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 AC138649.3-201ENST00000622154 254 ntBASIC3.34□□□□□ -1.87
NR1H4Q96RI1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NR1H4Q96RI1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NR1H4Q96RI1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
NR1H4Q96RI1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms