Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU6-390P-201ENST00000516259 103 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 SNORA31.9-201ENST00000516429 84 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AC015912.2-201ENST00000571053 181 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL109918.3-201ENST00000603072 338 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AC092447.9-201ENST00000603395 144 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL670379.6-201ENST00000603753 252 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL670379.1-201ENST00000604752 252 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL670379.5-201ENST00000605253 252 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL670379.8-201ENST00000605353 252 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AC018462.2-201ENST00000605375 395 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL670379.7-201ENST00000605823 252 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AC009570.1-201ENST00000609599 745 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 AL445437.1-201ENST00000623157 3087 ntBASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.11□□□□□ -1.59
SYNGAP1Q96PV0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AL161912.2-201ENST00000565707 3007 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.80-201ENST00000362996 102 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.485-201ENST00000384395 102 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.496-201ENST00000384444 101 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.556-201ENST00000384677 113 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-328P-201ENST00000390887 106 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AL080315.1-201ENST00000406055 466 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RPS4XP7-201ENST00000406274 780 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RPL7P10-201ENST00000417407 739 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RPS26P2-201ENST00000440331 348 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RPS27AP1-201ENST00000475545 471 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 MTCO3P44-201ENST00000510977 541 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC005798.1-201ENST00000513715 387 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 SNORA14.1-201ENST00000516113 141 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 SCARNA16.2-201ENST00000516520 172 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AL121576.1-201ENST00000556055 276 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 MIR3200-201ENST00000580767 85 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC233702.9-201ENST00000581528 203 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AL031176.1-201ENST00000604554 466 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC006329.2-201ENST00000611491 394 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC123768.4-201ENST00000616244 701 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AL138721.1-201ENST00000616756 179 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 MIR492-201ENST00000638676 116 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 AC139713.2-215ENST00000641428 5037 ntBASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SYNGAP1Q96PV0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 RNU1-83P-201ENST00000363426 164 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.307-201ENST00000365022 117 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-128P-201ENST00000383976 107 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 RNU1-13P-201ENST00000384499 162 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 SNORA16.2-201ENST00000390991 127 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 RNU2-3P-201ENST00000410144 191 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 EZH2P1-201ENST00000431167 291 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 RPL21P112-201ENST00000434403 463 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 VN1R105P-201ENST00000486595 910 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AP001086.1-201ENST00000494882 321 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AC026371.1-201ENST00000551867 419 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AC113403.1-201ENST00000604910 193 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AC020634.1-201ENST00000608701 549 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 AC010300.1-201ENST00000600671 5134 ntBASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SYNGAP1Q96PV0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SYNGAP1Q96PV0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms