Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC022364.2-201ENST00000457963 554 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 RPL21P11-201ENST00000461458 483 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC093278.1-201ENST00000494700 600 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 HMGB1P22-201ENST00000505315 124 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AF038458.1-201ENST00000588406 262 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC008945.2-201ENST00000606056 604 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 RMST_3.1-201ENST00000611651 109 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC092794.2-201ENST00000620933 563 ntBASIC3.8□□□□□ -1.8
VPS50Q96JG6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
VPS50Q96JG6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS50Q96JG6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS50Q96JG6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS50Q96JG6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS50Q96JG6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 CKAP2P1-201ENST00000555477 2049 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RNA5SP295-201ENST00000362655 121 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RNU6-223P-201ENST00000362830 107 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RNY3P3-201ENST00000363816 102 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 SNORA62.1-201ENST00000364287 154 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 MT-TL1-201ENST00000386347 75 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 SNORA48.7-201ENST00000391302 135 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AL590704.1-201ENST00000402856 794 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RNU2-39P-201ENST00000410604 198 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 OR9R1P-201ENST00000412200 877 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RPL7AP73-201ENST00000413490 353 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 OR51A5P-201ENST00000415429 942 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC007390.1-201ENST00000415722 356 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 MTCYBP8-201ENST00000422855 651 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 KCTD9P3-201ENST00000434597 1169 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 SETP5-201ENST00000437270 562 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 RPS29P15-201ENST00000458329 171 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RNU7-63P-201ENST00000459054 62 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC010285.1-201ENST00000470580 392 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC126389.1-201ENST00000477436 290 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC098799.2-201ENST00000509466 868 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 MIR5685-201ENST00000579080 79 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC024619.4-201ENST00000580924 316 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC012443.1-201ENST00000605605 231 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 MIR7151-201ENST00000617477 60 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC024940.5-201ENST00000622889 474 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 UBE3AP2-201ENST00000429033 2259 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS50Q96JG6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 AC006020.1-201ENST00000420179 1854 ntBASIC3.79□□□□□ -1.8
VPS50Q96JG6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS50Q96JG6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS50Q96JG6 RPL7P26-201ENST00000333817 754 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 SNORA72.1-201ENST00000363485 129 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 RNU4-48P-201ENST00000365559 182 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 MIR454-201ENST00000390180 115 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL359634.1-202ENST00000404721 284 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 SNORA11-201ENST00000408789 128 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 RNU4-6P-201ENST00000410804 122 ntBASIC3.78□□□□□ -1.8
VPS50Q96JG6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms