Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC022634.1-201ENST00000520765 532 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC022878.1-201ENST00000530684 149 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 MRPS36P5-201ENST00000551909 298 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AL158211.1-201ENST00000566763 763 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC078899.3-201ENST00000599065 212 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AP000860.1-201ENST00000605250 559 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC004805.2-201ENST00000605382 482 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AL031775.1-201ENST00000607014 887 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 RNU6-87P-201ENST00000607561 108 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC103710.2-201ENST00000609912 942 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC025594.3-201ENST00000613068 790 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.09□□□□□ -1.92
VPS33AQ96AX1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VPS33AQ96AX1 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 MTND5P19-201ENST00000424872 1794 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RNU6-884P-201ENST00000363889 107 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RNU6-817P-201ENST00000391083 104 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AL021407.1-201ENST00000404531 386 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 BX323014.1-201ENST00000412876 237 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 ISCA1P1-201ENST00000426679 387 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 USP9YP12-201ENST00000450481 570 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 MRPS17P3-201ENST00000465453 385 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RPS26P21-201ENST00000475397 348 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RPL36AP51-201ENST00000487216 318 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RPL21P13-201ENST00000488305 481 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RNU2-10P-201ENST00000516375 211 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 RNA5SP471-201ENST00000516971 106 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC010653.1-201ENST00000571108 881 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 MIR3922-201ENST00000585192 84 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC008739.2-201ENST00000597006 317 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC112191.3-201ENST00000604371 277 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC006338.1-201ENST00000618453 749 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 AC120349.3-201ENST00000624377 529 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 MTND4P4-201ENST00000439033 1366 ntBASIC3.08□□□□□ -1.92
VPS33AQ96AX1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS33AQ96AX1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 Z83843.1-201ENST00000604070 3685 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 UBE2L2-201ENST00000254302 429 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 RNU6-701P-201ENST00000384059 107 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 SNORA57.1-201ENST00000391227 145 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 RNU6-193P-201ENST00000410977 107 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 SEPT2P1-201ENST00000419651 180 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 HMGB1P9-201ENST00000429856 646 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 GPM6BP2-201ENST00000432046 144 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC007389.2-201ENST00000434630 306 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 SETP8-201ENST00000435341 628 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 NEFMP1-201ENST00000443423 1006 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 GPM6BP1-201ENST00000446387 144 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 RPL21P23-201ENST00000446654 460 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 FABP5P15-201ENST00000453566 214 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 MTCO2P29-201ENST00000465212 189 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 RPS3AP43-201ENST00000479743 781 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC010486.2-201ENST00000505572 483 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 FABP5P5-201ENST00000515537 406 ntBASIC3.07□□□□□ -1.92
VPS33AQ96AX1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms