Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.15□□□□□ -1.75
HPS3Q969F9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.15□□□□□ -1.75
HPS3Q969F9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS3Q969F9 MIR3690-201ENST00000580266 75 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.15□□□□□ -1.75
HPS3Q969F9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS3Q969F9 AC104458.1-201ENST00000608243 463 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HPS3Q969F9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS3Q969F9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.15□□□□□ -1.75
HPS3Q969F9 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.15□□□□□ -1.75
HPS3Q969F9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HPS3Q969F9 PRO1804-201ENST00000623780 2050 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AL353746.1-201ENST00000566293 6881 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HPS3Q969F9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HPS3Q969F9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HPS3Q969F9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HPS3Q969F9 RNU6-1090P-201ENST00000364065 94 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 Y_RNA.256-201ENST00000364594 104 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS3Q969F9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HPS3Q969F9 MIR514A1-201ENST00000385133 98 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 MIR670-201ENST00000390142 98 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HPS3Q969F9 AC068050.1-201ENST00000394891 380 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 PTMAP2-201ENST00000397627 327 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AL138878.1-201ENST00000405131 347 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 SNORA3.3-201ENST00000408712 125 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 RNA5SP129-201ENST00000410276 118 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 ZNF90P2-204ENST00000419323 1075 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.14□□□□□ -1.75
HPS3Q969F9 HMGB1P27-201ENST00000431429 603 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC007389.2-201ENST00000434630 306 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 TXNP1-201ENST00000441872 371 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 NEFMP1-201ENST00000443423 1006 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.14□□□□□ -1.75
HPS3Q969F9 FDX1P2-201ENST00000450769 375 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS3Q969F9 RN7SL93P-201ENST00000463035 293 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 RPL31P58-201ENST00000469001 379 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS3Q969F9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.14□□□□□ -1.75
HPS3Q969F9 RNA5SP468-201ENST00000516782 93 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 MTND1P35-201ENST00000526739 508 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 HSPE1P5-201ENST00000561489 272 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC034105.3-201ENST00000565294 442 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 AC005951.2-201ENST00000576282 495 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.14□□□□□ -1.75
HPS3Q969F9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.14□□□□□ -1.75
HPS3Q969F9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HPS3Q969F9 FAM35DP-201ENST00000323387 2712 ntBASIC4.14□□□□□ -1.75
HPS3Q969F9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS3Q969F9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS3Q969F9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 RNU6-946P-201ENST00000383878 107 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 RNU2-37P-201ENST00000410695 177 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.13□□□□□ -1.75
HPS3Q969F9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.13□□□□□ -1.75
HPS3Q969F9 AC093106.2-201ENST00000428212 385 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 MTND1P2-201ENST00000430604 821 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 MRPS17P3-201ENST00000465453 385 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 RN7SL542P-201ENST00000467147 294 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.13□□□□□ -1.75
HPS3Q969F9 OR5AL2P-201ENST00000532185 920 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.13□□□□□ -1.75
HPS3Q969F9 AC234778.2-201ENST00000566241 354 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.13□□□□□ -1.75
HPS3Q969F9 AC008739.3-201ENST00000603262 127 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AC174048.1-201ENST00000603389 144 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AC104763.2-201ENST00000604179 382 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS3Q969F9 AC130324.3-201ENST00000614165 542 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AL354950.2-201ENST00000617939 290 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 uc_338.11-201ENST00000619132 160 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 MIR6075-201ENST00000620782 95 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 AC093648.1-201ENST00000623546 606 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS3Q969F9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS3Q969F9 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
HPS3Q969F9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HPS3Q969F9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS3Q969F9 OR4G2P-202ENST00000641004 1759 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
HPS3Q969F9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HPS3Q969F9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HPS3Q969F9 SNORA62.1-201ENST00000364287 154 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 SMIM11P1-201ENST00000369586 178 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.12□□□□□ -1.75
HPS3Q969F9 RNU6-877P-201ENST00000383868 107 ntBASIC4.12□□□□□ -1.75
HPS3Q969F9 U8.11-201ENST00000384699 133 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms