Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-CQ95604 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-CQ95604 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-CQ95604 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-CQ95604 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-CQ95604 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-CQ95604 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 AP005403.1-201ENST00000579720 229 ntBASIC5.63□□□□□ -1.51
HLA-CQ95604 MIR4420-201ENST00000583944 77 ntBASIC5.63□□□□□ -1.51
HLA-CQ95604 BRDTP1-201ENST00000605735 677 ntBASIC5.63□□□□□ -1.51
HLA-CQ95604 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 AC099506.2-201ENST00000623074 221 ntBASIC5.63□□□□□ -1.51
HLA-CQ95604 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-CQ95604 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-CQ95604 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HLA-CQ95604 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-CQ95604 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
HLA-CQ95604 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HLA-CQ95604 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-CQ95604 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.63□□□□□ -1.51
HLA-CQ95604 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-CQ95604 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-CQ95604 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-CQ95604 AL359693.1-201ENST00000614959 2407 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 MIR410-201ENST00000362222 80 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 RNU6-336P-201ENST00000364891 107 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 RNU6-843P-201ENST00000384454 104 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 RNU6-1154P-201ENST00000391001 104 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 MTCO1P39-201ENST00000426148 480 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 AC009296.1-201ENST00000443146 155 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 REG1CP-206ENST00000447469 496 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-CQ95604 RNU6-1114P-201ENST00000516022 107 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 SNORA31.18-201ENST00000517043 134 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 RNA5SP373-201ENST00000517271 95 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-CQ95604 AC091193.1-201ENST00000604640 448 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-CQ95604 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-CQ95604 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-CQ95604 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HLA-CQ95604 AC114774.1-201ENST00000507410 1770 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 AC026523.2-201ENST00000625039 7739 ntBASIC5.62□□□□□ -1.51
HLA-CQ95604 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-CQ95604 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-CQ95604 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HLA-CQ95604 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 DEFB108F-201ENST00000344638 222 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RNU6-173P-201ENST00000364215 104 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 Y_RNA.230-201ENST00000364348 109 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 Y_RNA.286-201ENST00000364813 102 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RNU6-356P-201ENST00000384140 107 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RNU6-318P-201ENST00000384283 103 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 DDX39BP1-205ENST00000422507 192 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RPS6P12-201ENST00000432491 726 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 CKS1BP5-201ENST00000434172 273 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-CQ95604 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-CQ95604 AL359073.1-201ENST00000448036 403 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-CQ95604 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-CQ95604 RPL23AP24-201ENST00000458203 385 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 snoU13.1-201ENST00000459157 104 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 AC091959.1-201ENST00000495857 238 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 HMGB3P16-201ENST00000508037 287 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 SCARNA15.2-201ENST00000516409 127 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RNU7-110P-201ENST00000516891 62 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RN7SKP260-201ENST00000516907 149 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-CQ95604 AC083837.1-201ENST00000565297 2994 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-CQ95604 AL162431.4-201ENST00000604674 411 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 RPL23AP88-201ENST00000605759 454 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 SCARNA4-202ENST00000625402 129 ntBASIC5.61□□□□□ -1.51
HLA-CQ95604 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-CQ95604 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms