Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 MIR3690-201ENST00000580266 75 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC124864.2-201ENST00000624736 186 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 MIR6863-201ENST00000636112 90 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TM9SF4Q92544 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TM9SF4Q92544 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
TM9SF4Q92544 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.89
TM9SF4Q92544 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TM9SF4Q92544 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TM9SF4Q92544 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TM9SF4Q92544 Y_RNA.372-201ENST00000365599 102 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 MIR19A-201ENST00000384878 82 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 RAC1P7-201ENST00000445367 377 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 Z99127.3-201ENST00000448158 395 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC013267.1-201ENST00000458227 267 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 U3.44-201ENST00000458938 192 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AL121769.1-201ENST00000469473 401 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TM9SF4Q92544 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 OR4R3P-201ENST00000525084 838 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 FAM92A1P1-201ENST00000528023 890 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 MIR3146-201ENST00000580367 79 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 NRBF2P1-201ENST00000587407 859 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 SNRPGP15-201ENST00000600149 222 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC121334.2-201ENST00000605387 271 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 AL356585.4-201ENST00000623078 1229 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
TM9SF4Q92544 AC005183.1-201ENST00000603687 1979 ntBASIC3.21□□□□□ -1.9
TM9SF4Q92544 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC093536.2-201ENST00000565257 1406 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 Y_RNA.248-201ENST00000364501 109 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 MIR1250-201ENST00000408098 113 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 U3.39-201ENST00000408569 239 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 RNU4-55P-201ENST00000410731 137 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC127391.1-201ENST00000411737 98 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 PIGFP2-201ENST00000421400 651 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 MTCO2P11-201ENST00000431069 680 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 MRPS10P2-201ENST00000431226 381 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 OR4K11P-201ENST00000431829 904 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AL139415.2-201ENST00000431968 163 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 NEK4P1-201ENST00000433383 879 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 RN7SL594P-201ENST00000470590 287 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 VN1R17P-201ENST00000472048 1090 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC021205.2-201ENST00000480069 347 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 APOOP4-201ENST00000513530 597 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 RNU6-798P-201ENST00000516912 103 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC134698.4-201ENST00000523451 826 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AK6P1-201ENST00000540219 478 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 SYF2P1-201ENST00000550658 413 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 MIR3167-201ENST00000579623 85 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC068790.3-201ENST00000602988 553 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC245014.2-201ENST00000603689 287 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AL391646.1-201ENST00000603860 190 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 RBM11P1-201ENST00000604951 799 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 AC246785.4-201ENST00000605374 287 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 AL133173.2-201ENST00000614270 90 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 U4.5-201ENST00000617137 123 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 PLCE1P1-201ENST00000622094 305 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 SCARNA15.3-201ENST00000626315 122 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 SCARNA4.1-201ENST00000628597 123 ntBASIC3.2□□□□□ -1.9
TM9SF4Q92544 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms