Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 U3.44-201ENST00000458938 192 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 RNU7-63P-201ENST00000459054 62 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 HMGN1P12-201ENST00000499125 195 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 HSPD1P15-201ENST00000505573 1122 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 AC026784.1-201ENST00000507986 352 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.62□□□□□ -1.67
RTF1Q92541 SNORD27.1-201ENST00000516319 72 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 RNU6-798P-201ENST00000516912 103 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.62□□□□□ -1.67
RTF1Q92541 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.62□□□□□ -1.67
RTF1Q92541 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.62□□□□□ -1.67
RTF1Q92541 CR383656.7-201ENST00000548164 174 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.62□□□□□ -1.67
RTF1Q92541 AL133153.1-201ENST00000557756 303 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.62□□□□□ -1.67
RTF1Q92541 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.62□□□□□ -1.67
RTF1Q92541 RMST_3.1-201ENST00000611651 109 ntBASIC4.62□□□□□ -1.67
RTF1Q92541 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.62□□□□□ -1.67
RTF1Q92541 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RTF1Q92541 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RTF1Q92541 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.61□□□□□ -1.67
RTF1Q92541 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RTF1Q92541 RNU6-511P-201ENST00000363496 107 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RNU5E-8P-201ENST00000363502 116 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RNVU1-14-201ENST00000384770 164 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 MIR558-201ENST00000384920 94 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 SNORA11.1-201ENST00000408133 129 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 U3.39-201ENST00000408569 239 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RNU2-47P-201ENST00000410649 186 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RNU6-373P-201ENST00000411247 98 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RN7SKP53-201ENST00000411337 315 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 OR1AA1P-201ENST00000419597 916 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RPL21P109-201ENST00000422213 475 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.61□□□□□ -1.67
RTF1Q92541 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.61□□□□□ -1.67
RTF1Q92541 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.61□□□□□ -1.67
RTF1Q92541 PMCHL2-203ENST00000457791 237 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RPL21P10-201ENST00000463521 490 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RPL39P36-201ENST00000490784 156 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 AC114786.4-201ENST00000508771 728 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 PCBP2P3-201ENST00000509726 843 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 LRRC34P2-201ENST00000514850 553 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 RNU2-10P-201ENST00000516375 211 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.61□□□□□ -1.67
RTF1Q92541 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.61□□□□□ -1.67
RTF1Q92541 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.61□□□□□ -1.67
RTF1Q92541 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.61□□□□□ -1.67
RTF1Q92541 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.61□□□□□ -1.67
RTF1Q92541 AC015917.1-201ENST00000579654 510 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 C8orf59P2-201ENST00000603441 271 ntBASIC4.61□□□□□ -1.67
RTF1Q92541 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.61□□□□□ -1.67
RTF1Q92541 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.61□□□□□ -1.67
RTF1Q92541 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.61□□□□□ -1.67
RTF1Q92541 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.61□□□□□ -1.67
RTF1Q92541 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RTF1Q92541 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
RTF1Q92541 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTF1Q92541 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RTF1Q92541 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTF1Q92541 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.6□□□□□ -1.67
RTF1Q92541 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.6□□□□□ -1.67
RTF1Q92541 Y_RNA.72-201ENST00000362894 103 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 Y_RNA.157-201ENST00000363638 102 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 RNU4-48P-201ENST00000365559 182 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 RNU6-516P-201ENST00000411381 104 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 OR51A5P-201ENST00000415429 942 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 CYP4F29P-201ENST00000420685 446 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 MED13P1-201ENST00000428342 171 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.6□□□□□ -1.67
RTF1Q92541 RPL23AP33-201ENST00000442301 452 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC016696.1-201ENST00000446949 318 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 RPS20P20-201ENST00000460498 340 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC068305.1-201ENST00000497406 726 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 MTCO2P30-201ENST00000503662 364 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 FTH1P9-201ENST00000513251 355 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.6□□□□□ -1.67
RTF1Q92541 SNORD60.2-201ENST00000516883 86 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AL133271.1-201ENST00000538229 291 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.6□□□□□ -1.67
RTF1Q92541 NCAPGP2-201ENST00000557911 754 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 MIR4458-201ENST00000578872 75 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.6□□□□□ -1.67
RTF1Q92541 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.6□□□□□ -1.67
RTF1Q92541 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.6□□□□□ -1.67
RTF1Q92541 AL117336.2-201ENST00000602435 335 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AP001429.1-201ENST00000602568 530 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC006254.3-201ENST00000603353 884 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AL031176.1-201ENST00000604554 466 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AL158211.4-201ENST00000606988 584 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC096577.2-201ENST00000611455 153 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AL603758.1-201ENST00000618654 241 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 AC022140.2-201ENST00000623500 188 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 OTUD4P1-201ENST00000237841 3067 ntBASIC4.6□□□□□ -1.67
RTF1Q92541 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTF1Q92541 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.6□□□□□ -1.67
RTF1Q92541 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.6□□□□□ -1.67
RTF1Q92541 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTF1Q92541 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTF1Q92541 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.59□□□□□ -1.67
RTF1Q92541 XIAPP3-201ENST00000312918 795 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms